Gene Information

Name : Curi_c04860 (Curi_c04860)
Accession : YP_006787408.1
Strain : Clostridium acidurici 9a
Genome accession: NC_018664
Putative virulence/resistance : Resistance
Product : signal transduction response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 528660 - 529346 bp
Length : 687 bp
Strand : +
Note : -

DNA sequence :
ATGTCAAAGAAAATTTTAATAGTTGATGATGATGAAGAAATAAGGAAAGTTATAGGAATATATTTAGAAAATGAAGGGTA
TGAAATACTTAAAGCTGAAAATGGAGAGCAAGCATTAAAACTTATAGCTGAAAATGAGGTTGCCCTTGTACTTTTGGACA
TTATGATGCGTGGTATGAATGGTACAGAAGTTTGTATGAAGATTAGAGAAGATAGTATTATGCCAATAATTTTTTTATCT
GCAAAATCAGAAGATTTAGATAAAATTCAAGGTCTAGCTTCTGGGGCTGATGACTATATTACCAAGCCTTTTAGTGCAAT
GGAGTTAATCGCAAGGGTTAAATCTCAGATAAGAAGGTACACTAGGTATACAACTGAGTTAAGAACACCTAAAAATATAA
TTGAAGTTGGTAACTTAACTATAAATACTGACACAAGACAAGTGATTGTGGGTAATAAAGACGTTAGACTTACTCCAAAA
GAATTTGATATATTACATCTTCTCGCAAGTAATAAAGGAATCGTTTTTAGTATAGAAAAGATTTATGAAAGAGTATGGGG
TGAAGATTTTTACAAATCTGATAATACTATAATGGTTCATATAACTAAAATAAGAGAAAAGATAGAAGAAGACCCTAAGA
GACCTATATATATTAAAACAGTTTGGGGAGTTGGGTATAAGATATGA

Protein sequence :
MSKKILIVDDDEEIRKVIGIYLENEGYEILKAENGEQALKLIAENEVALVLLDIMMRGMNGTEVCMKIREDSIMPIIFLS
AKSEDLDKIQGLASGADDYITKPFSAMELIARVKSQIRRYTRYTTELRTPKNIIEVGNLTINTDTRQVIVGNKDVRLTPK
EFDILHLLASNKGIVFSIEKIYERVWGEDFYKSDNTIMVHITKIREKIEEDPKRPIYIKTVWGVGYKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
nisR2 YP_006309922.1 NisR Not tested FWisland_1 Protein 1e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Curi_c04860 YP_006787408.1 signal transduction response regulator AF155139.2.orf0.gene Protein 1e-53 50
Curi_c04860 YP_006787408.1 signal transduction response regulator NC_014475.1.orf0.gen Protein 5e-50 49
Curi_c04860 YP_006787408.1 signal transduction response regulator NC_005054.2598277.p0 Protein 5e-50 49
Curi_c04860 YP_006787408.1 signal transduction response regulator DQ212986.1.gene4.p01 Protein 1e-46 48
Curi_c04860 YP_006787408.1 signal transduction response regulator AM180355.1.gene1830. Protein 6e-46 48
Curi_c04860 YP_006787408.1 signal transduction response regulator FJ349556.1.orf0.gene Protein 2e-52 48
Curi_c04860 YP_006787408.1 signal transduction response regulator AF130997.1.orf0.gene Protein 7e-46 47
Curi_c04860 YP_006787408.1 signal transduction response regulator AF162694.1.orf4.gene Protein 3e-42 44
Curi_c04860 YP_006787408.1 signal transduction response regulator EU250284.1.orf4.gene Protein 1e-44 43
Curi_c04860 YP_006787408.1 signal transduction response regulator NC_012469.1.7685629. Protein 7e-36 42
Curi_c04860 YP_006787408.1 signal transduction response regulator NC_012469.1.7686381. Protein 4e-39 41