Gene Information

Name : Curi_c22940 (Curi_c22940)
Accession : YP_006789143.1
Strain : Clostridium acidurici 9a
Genome accession: NC_018664
Putative virulence/resistance : Resistance
Product : two-component response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2406519 - 2407085 bp
Length : 567 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAGAAAAGATATTAGTAGTTGAAGATGATATTGAGATAGCATTTGCAATTAAAGAATTTTTAGCGAAAAAGAGATA
TGCTATCACATGGACTTCAACGGGTAAGGAAGGACTGGAAGAATTTCAGAAAAATAAATATGATCTAGTGATAGTAGATA
TAATGATGCCAGAAATGGATGGATTCACATTATGCAAAAACATTCGAATGAAAAGTGATATTCCAATCTTGATTATGAGT
GCTAAGAGTCAAGAGAAAGATAAAGTGAAAGGTCTAAATATAGGTGCAGATGATTATATAACTAAACCATTTAGCCTCGT
AGAATTAGAGGCAAGAATAGATTCACATATAAGAAGATATAAGAGATATTTAGGTGAAAATAAAGAAGAAAAAATAATAC
AGTATAAAGATGGTCTTAAATTATATAAAGATTTAGAAGAAATTGAACTCAATGATAAAAAACTTCACTTTACAATAAAA
GAATATTCACTACTTGCACTATTAATAAAAACAAGGATCGGGTATTTTCCAAAAAGGAACTGTATGAAAACATATAGGGG
GAAGTAG

Protein sequence : 
MKEKILVVEDDIEIAFAIKEFLAKKRYAITWTSTGKEGLEEFQKNKYDLVIVDIMMPEMDGFTLCKNIRMKSDIPILIMS
AKSQEKDKVKGLNIGADDYITKPFSLVELEARIDSHIRRYKRYLGENKEEKIIQYKDGLKLYKDLEEIELNDKKLHFTIK
EYSLLALLIKTRIGYFPKRNCMKTYRGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU98_0912 YP_001200470.1 NisR Not tested 89K Protein 4e-16 42
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 6e-23 41
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 4e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Curi_c22940 YP_006789143.1 two-component response regulator AM180355.1.gene1830. Protein 3e-25 42
Curi_c22940 YP_006789143.1 two-component response regulator HE999704.1.gene1202. Protein 6e-23 41
Curi_c22940 YP_006789143.1 two-component response regulator NC_005054.2598277.p0 Protein 4e-28 41
Curi_c22940 YP_006789143.1 two-component response regulator NC_014475.1.orf0.gen Protein 4e-28 41
Curi_c22940 YP_006789143.1 two-component response regulator AF155139.2.orf0.gene Protein 3e-25 41