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Name : capL (Curi_c20970) Accession : YP_006788948.1 Strain : Clostridium acidurici 9a Genome accession: NC_018664 Putative virulence/resistance : Virulence Product : capsular polysaccharide biosynthesis protein, type 1 Function : - COG functional category : - COG ID : - EC number : 1.1.1.- Position : 2213315 - 2214634 bp Length : 1320 bp Strand : - Note : - DNA sequence : ATGAACAATATGTATGAGGAAATAATAATCGGAGAGAAGAAAATTGCAGTTGTAGGTCTTGGTTATGTTGGAATGCCACT AGCTGTGTCATTTAGTAAGAAAGTAAAAACTATAGGATTTGATATTAATAAAGATAAAGTTAAGAAGTATCTAAATGGTA AAGATCCAACCAATGAAGTTGGAGATGATGAAATAAAATCATGTAAAGTTGATTTCACTTGGGATGAAAATAAATTAAAA GAAGTGAATTTCATTGTAATAGCAGTTCCTACACCAATTAATCATGATAAAACTCCAGACTTAACACCTTTAATAGAGGC TTCTAAATTAGTTGGTCGCAATCTAACTAAAGGATCAATAGTAGTGTATGAATCGACTGTTTTCCCAGGTGTCACAGAGG ATATTTGTATACCTACTATTGAAGCTGAGTCGGGTTTAGAGTGTGGTAGAGACTTTAAAGTTGGATATTCACCTGAGCGA ATTAATCCAGGGGATAAAGTAAATAGATTAGAGAATATTGTTAAAATAGTATCTGGAATAGATGATGAGTCTATGGAAAC TATTGCACAAGTATATGAAATGATTATTGAAGCAGGAGTACACAGGGCTAAAAGTATTAAGGTCGCAGAAGCAGCCAAAT TAGTTGAAAATACTCAAAGAGATATAAATATTGCATTTATGAATGAATTAGCCATTGTTTTCGAGAAAATGGATATCAAT ACTAGCGAAGTAATTGATGCGATGAATACAAAGTGGAATGCGCTGGGATTCACGCCAGGACTTGTTGGAGGTCATTGTAT TGGGGTTGATCCTTATTATTTTATTTATCAGGCGGAGAAACTAGGTTATCATTCACAAATTATCCTATCTGGTAGAAAAA TTAATGACGATATGGGCAATTTTATTGCTGATATTTCTATTAAAAATATGATTAAGGCTAAAATTGCTGTAAATGAAGCA AATATTTATATTTTGGGTATTACATTTAAGGAGAACTGTTCTGATATTAGAAATTCTAAGGTATTAGATATTATAAATAG ATTTAAAGAATATGATGTGGATGTTAAGGTCGTAGACCCAGTAGCTGATGCTGAAGAAATTAAACAGTTCTATAATATAG ATTTAGTAAATTTAGATAAGGTAAAAGATGCGGATTGTATAATATTTGCAGTTAGCCATGATGAATTTAAGGAACTATCT ATAAAAGAAATTAAGAATATGTATCGAAATGATTTAAATGCGAAGAAAACATTAATTGATGTAAAGAGCATATTCAAAAA GCAAGATATGAACGAAGATTTCATATATTGGTCTTTATAA Protein sequence : MNNMYEEIIIGEKKIAVVGLGYVGMPLAVSFSKKVKTIGFDINKDKVKKYLNGKDPTNEVGDDEIKSCKVDFTWDENKLK EVNFIVIAVPTPINHDKTPDLTPLIEASKLVGRNLTKGSIVVYESTVFPGVTEDICIPTIEAESGLECGRDFKVGYSPER INPGDKVNRLENIVKIVSGIDDESMETIAQVYEMIIEAGVHRAKSIKVAEAAKLVENTQRDINIAFMNELAIVFEKMDIN TSEVIDAMNTKWNALGFTPGLVGGHCIGVDPYYFIYQAEKLGYHSQIILSGRKINDDMGNFIADISIKNMIKAKIAVNEA NIYILGITFKENCSDIRNSKVLDIINRFKEYDVDVKVVDPVADAEEIKQFYNIDLVNLDKVKDADCIIFAVSHDEFKELS IKEIKNMYRNDLNAKKTLIDVKSIFKKQDMNEDFIYWSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 5e-106 | 52 |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 3e-89 | 52 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 3e-89 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| capL | YP_006788948.1 | capsular polysaccharide biosynthesis protein, type 1 | VFG0431 | Protein | 1e-89 | 52 |
