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Name : pilB (Curi_c12760) Accession : YP_006788134.1 Strain : Clostridium acidurici 9a Genome accession: NC_018664 Putative virulence/resistance : Virulence Product : pilus assembly protein, ATPase/type II secretion system protein E Function : - COG functional category : - COG ID : - EC number : - Position : 1378427 - 1380067 bp Length : 1641 bp Strand : + Note : - DNA sequence : ATGAAGAAAAAATTTGGAATGTATTTACTAGATGAAGGTGTTATCAACCTAGAAGATATTAATGAAGCTTTAAAAATACA AAAAAGAATGGGACTAATGTTTGGAGAAACACTAGTCCAAATGGGCTGTATTAATAATGACGATATGATTTTTCATTTAG GAAAATTTTTGGGAGTTAAAACTGCAAAATTATCAGATGTAACTCTATTACATAACTTTATAATTAAGATTCCAAAAAAA ATTGCTTTACAGCATCAGATAACGCCAGTTAAATTTAAGGATGAAGATGATTTATATATTGCTTTTTATAAAACTGCAAA TCACTCTATCTTTGAAAATCTAAAGAGAGTTTTAAAAACTAGCTTTCATCCACTATTAATGAGTGAACGAGATAGCGTAA GTCTTTTTAAACAAGCATATCCGCAAGAACTTAAACAAGAAGAAGTTACTGAAATAGACACAGATCTAGGGAATCTAGAT GAAACAATAGAACTTGTTGATAATATAATCATAAAAGCTATATCATTAGAAGCATCTGACATACACATAGAACCTGAAAT CGAACATCTTAGAGTAAGATTTAGAATAGATGGAGTATTAAGAACTGTGGAGCTATTACCTATAGAGGTTGCAGAATCGG TCATTTTAAGGATAAAGGTTCTATCAGACATGAATATTGCAGATAAGAGAAGTCCACAGGATGGAGGCTTCAAATTTGAC AAAACAGAAGAAATTGGTGTATCCATAAATCTAAGGGTTTCCGCATTACCTTGTTCTTTGGGTGAAAAGGTAGTAATTAG ACTTTTACCTACAGAGGAAAAAATATTGACAATAGAAGAATTAGGAATGAGTAAAGAAATGACTAAGGATTTTAAATCAA TGTTAGAACTTCCATACGGAATAATTTTTGTTACGGGCCCCACGGGCAGTGGTAAGACAAATACACTATATGCTTCTATA AACTTTTTGCGAAGTGATGAGGTAAATATTACTACAGTAGAAGACCCTATAGAACTAGACATTAGTGGAATAAATCAAAC ACAGGTATCTAGGGGAAATAGCTTTGACTTTAGCAAAGCATTAAAGGCTATGTTAAGACAAGACCCTAATATTATAATGG TAGGAGAAGTTAGAGATGGACAAACAGCTGGACTTGCACTAGAAGCAGCTCTAACAGGACACCTTGTGTTGTCTACACTA CATACAAATGATGCTACAAGTGTTTTTGGAAGACTTATAGACATGGGGTGTGAAACTTTTTTAGTAACATCATCTATAAG AGCAGTTTTAGCACAACGTTTAGTAAGGGTATTATGTCCAGGGTGTAAAGAAGCATACACACCAGATAATGCTGAACTTA TGTTATTAGGTATAGATAAAGAGAAGGATACCGTCTTTTATAGAGAAAGAGGTTGTAATAGCTGTAACAATAGTGGATAT AGAGGGAGAACGGGTATATTTGAGTTATTTATTTTAAATCCTGAAATTCAAAGTAATGTTAATAAAACTTTAGACATGTC TATGATAAGAAATATGGCAATACAAAATGGTATGAAAACTCTTCGTGAAGATGGCATCAGAAAATTAAAGGAAGGAATTA CTTCTACTACAGAAATTTTAAAGGCAACTTCAGAATGGTAG Protein sequence : MKKKFGMYLLDEGVINLEDINEALKIQKRMGLMFGETLVQMGCINNDDMIFHLGKFLGVKTAKLSDVTLLHNFIIKIPKK IALQHQITPVKFKDEDDLYIAFYKTANHSIFENLKRVLKTSFHPLLMSERDSVSLFKQAYPQELKQEEVTEIDTDLGNLD ETIELVDNIIIKAISLEASDIHIEPEIEHLRVRFRIDGVLRTVELLPIEVAESVILRIKVLSDMNIADKRSPQDGGFKFD KTEEIGVSINLRVSALPCSLGEKVVIRLLPTEEKILTIEELGMSKEMTKDFKSMLELPYGIIFVTGPTGSGKTNTLYASI NFLRSDEVNITTVEDPIELDISGINQTQVSRGNSFDFSKALKAMLRQDPNIIMVGEVRDGQTAGLALEAALTGHLVLSTL HTNDATSVFGRLIDMGCETFLVTSSIRAVLAQRLVRVLCPGCKEAYTPDNAELMLLGIDKEKDTVFYRERGCNSCNNSGY RGRTGIFELFILNPEIQSNVNKTLDMSMIRNMAIQNGMKTLREDGIRKLKEGITSTTEILKATSEW |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 4e-70 | 44 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-70 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pilB | YP_006788134.1 | pilus assembly protein, ATPase/type II secretion system protein E | VFG0182 | Protein | 3e-76 | 47 |
| pilB | YP_006788134.1 | pilus assembly protein, ATPase/type II secretion system protein E | VFG1876 | Protein | 1e-65 | 45 |
| pilB | YP_006788134.1 | pilus assembly protein, ATPase/type II secretion system protein E | VFG2048 | Protein | 3e-72 | 44 |
| pilB | YP_006788134.1 | pilus assembly protein, ATPase/type II secretion system protein E | VFG1880 | Protein | 8e-67 | 44 |
| pilB | YP_006788134.1 | pilus assembly protein, ATPase/type II secretion system protein E | VFG2426 | Protein | 2e-62 | 41 |
