Gene Information

Name : O3O_26032 (O3O_26032)
Accession : YP_006786881.1
Strain :
Genome accession: NC_018662
Putative virulence/resistance : Virulence
Product : YubP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 25540 - 26340 bp
Length : 801 bp
Strand : -
Note : -

DNA sequence :
ATGCGATTAGCTTCCCGTTTTGGTCGATATAATTCTATTCGCCGTGAGCGCCCGTTAACGGATGACGAATTAATGCAGTT
TGTTCCATCTGTCTTTTCTGGTGATAAACATGAATCCCGGAGTGAGCGTTATACATATATCCCAACCATCAATATCATCA
ATAAGTTACGTGATGAAGGTTTCCAGCCGTTCTTTGCCTGTCAGAGTCGGGTTCATGATTTGGGACGCCGCGAATACAGT
AAACATATGTTACGTCTTCGCAGGGAAGGGTATATTAACGGGAAAGAAGTTCCTGAAATTATCCTGCTTAATTCACATGA
TGGTTCATCCAGTTATCAGATGATCCCAGGAATTTTTCGTTTTGTCTGCACAAATGGCCTGGTGTGTGGGAATAATTTTG
GCGAAATCCGCGTTCCACATAAAGGAGATATTGTCGGGCAGGTTATTGAGGGAGCGTATGAAGTGCTCGGTGTCTTTGAT
AAAGTCACTGAAAATATGGAGACAATGAAAGAGATACATCTTAACAGTGACGAACAACATTTATTTGGCAGAGCTGCATT
GATGGCCAGGTACGAAGATGAAAATAAAACGCCAGTGACGCCAGAACAAATAATTACTCCCCGCCGTTGGGAGGATAAAC
AGAACGATTTCTGGACAACCTGGCAGCGGGTTCAGGAGAATATGATAAAAGGTGGATTATCGGGGCGAAGTGCCTCCGGT
AAAAATACCAGAACAAGAGCCATTACAGGCATTGACGGTGATATCCGAATCAACAAAGCATTATGGATGATTGCCGAATA
G

Protein sequence :
MRLASRFGRYNSIRRERPLTDDELMQFVPSVFSGDKHESRSERYTYIPTINIINKLRDEGFQPFFACQSRVHDLGRREYS
KHMLRLRREGYINGKEVPEIILLNSHDGSSSYQMIPGIFRFVCTNGLVCGNNFGEIRVPHKGDIVGQVIEGAYEVLGVFD
KVTENMETMKEIHLNSDEQHLFGRAALMARYEDENKTPVTPEQIITPRRWEDKQNDFWTTWQRVQENMIKGGLSGRSASG
KNTRTRAITGIDGDIRINKALWMIAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 1e-79 63
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 1e-80 63
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 5e-81 63
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 5e-81 63
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 5e-81 63
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 2e-81 63
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 2e-83 63
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 3e-79 63
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 4e-79 63
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 4e-79 63
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 2e-79 62
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 2e-79 62
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 5e-81 62
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 5e-81 62
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 2e-79 61
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 1e-81 55
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 1e-77 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O3O_26032 YP_006786881.1 YubP VFG1615 Protein 6e-80 63
O3O_26032 YP_006786881.1 YubP VFG1526 Protein 6e-81 63
O3O_26032 YP_006786881.1 YubP VFG0658 Protein 8e-80 62
O3O_26032 YP_006786881.1 YubP VFG1676 Protein 1e-79 61