Gene Information

Name : O3O_25250 (O3O_25250)
Accession : YP_006781880.1
Strain : Escherichia coli 2009EL-2071
Genome accession: NC_018661
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 64829 - 65212 bp
Length : 384 bp
Strand : +
Note : COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit

DNA sequence : 
ATGTACGCAAAATCTTTTCTCGCACTTGATGGCAACGGACGTCTGACCGGTGCCCGTACCGCACAGACTGCACCTTATGA
TCGCTACACCTGCCACCTTTGCGGCAGTGCACTCAGATACCACCCGCAATACGACACTGAACGTCCCTGGTTTGAACACA
CTGACGACGGGCTGACAGCGCACGGTCAGCAGTGTCCTTATGTCAGACCGGAACGCAGGGAGGTACGCTTGATTCAGCGT
CTGCAGCAATTCGTACCGGATGCCTTACCCGTGGTGCGTAAAGCCAGCTGGCACTGCAGACAATGTCACCACGATTATTA
TGGGGAGCGGTACTGCACACACTGCCAGACCGGGCGCTTCAGTGAGGAGGTGGTAGCAGGATGA

Protein sequence : 
MYAKSFLALDGNGRLTGARTAQTAPYDRYTCHLCGSALRYHPQYDTERPWFEHTDDGLTAHGQQCPYVRPERREVRLIQR
LQQFVPDALPVVRKASWHCRQCHHDYYGERYCTHCQTGRFSEEVVAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAI43833.1 hypothetical protein Not tested LEE Protein 7e-53 96
unnamed ADD91715.1 hypothetical protein Not tested PAI-I AL862 Protein 3e-52 95
aec60 AAW51743.1 Aec60 Not tested AGI-3 Protein 1e-54 94
ECO103_3572 YP_003223433.1 hypothetical protein Not tested LEE Protein 1e-52 91
APECO1_1083 YP_853103.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 3e-50 91
unnamed AAK00467.1 unknown Not tested SHI-1 Protein 1e-53 90
S3186 NP_838469.1 hypothetical protein Not tested SHI-1 Protein 2e-53 90
SF2981 NP_708755.1 hypothetical protein Not tested SHI-1 Protein 2e-53 90
unnamed CAE85181.1 hypothetical protein Not tested PAI V 536 Protein 8e-49 86

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O3O_25250 YP_006781880.1 hypothetical protein VFG0645 Protein 6e-54 90