Gene Information

Name : O3O_25350 (O3O_25350)
Accession : YP_006781860.1
Strain : Escherichia coli 2009EL-2071
Genome accession: NC_018661
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 49639 - 50127 bp
Length : 489 bp
Strand : -
Note : -

DNA sequence :
ATGAAACTGGCCCTGACGCTGGAAGCCGACAGCGTTAACGTGCAGGCACTGAACATGGGGCGCATTGTCGTTGACGTCGA
TGGTGTTAATCTCAGTGAACTGATTAACAAGGTCTCTGAAAACGGTTATTCACTCCGCGTGGTCGATAAATCCGACCAAC
ACGCAACCAGTACACCACCACCGTTAACAACCCTTACCTGCATACGTTGCAGCACCGCACATATCACGGAAACGGACAAC
GCCTGGCTGTACTCGCTGTCACACCAGACTAATGACGACGGCGAAACAGAATGGATTCATTTTACAGGCAGCGGCTATCT
GTTACGTACCGATGCATGGTCGTACCCGGTTCTGCGGCTTAAACGCCTGGGCCTGTCCAGAACGTTCCGTCGTCTGGTCG
TCACTCTCACCCGGCGTTATGGCGTCAGTCTCATTCATCTGGACGCCGGCGCAGAATGTCTGCCGGGGCTCCCCACTTTC
GACTGGTAA

Protein sequence :
MKLALTLEADSVNVQALNMGRIVVDVDGVNLSELINKVSENGYSLRVVDKSDQHATSTPPPLTTLTCIRCSTAHITETDN
AWLYSLSHQTNDDGETEWIHFTGSGYLLRTDAWSYPVLRLKRLGLSRTFRRLVVTLTRRYGVSLIHLDAGAECLPGLPTF
DW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yeeW NP_838488.1 hypothetical protein Not tested SHI-1 Protein 6e-57 99
yeeW NP_708774.1 hypothetical protein Not tested SHI-1 Protein 6e-57 99
unnamed AAK00483.1 unknown Not tested SHI-1 Protein 4e-50 99
APECO1_3485 YP_854326.1 hypothetical protein Not tested PAI I APEC-O1 Protein 8e-56 97
yeeW AAZ04462.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 6e-56 97
yeeW CAE85205.1 YeeW protein Not tested PAI V 536 Protein 1e-52 91
yeeW ADD91698.1 YeeW Not tested PAI-I AL862 Protein 2e-52 89
c5148 NP_756996.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-51 88
unnamed AAL08479.1 unknown Not tested SRL Protein 6e-50 86
Z1223 NP_286758.1 hypothetical protein Not tested TAI Protein 7e-51 86
Z1662 NP_287164.1 hypothetical protein Not tested TAI Protein 7e-51 86
ECO103_3593 YP_003223450.1 hypothetical protein Not tested LEE Protein 8e-50 85
aec77 AAW51760.1 Aec77 Not tested AGI-3 Protein 7e-51 85
yeeW CAI43849.1 YeeW protein Not tested LEE Protein 2e-51 85
unnamed AAC31487.1 L0008 Not tested LEE Protein 3e-50 85
unnamed ACU09434.1 conserved hypothetical protein Not tested LEE Protein 3e-50 85
Z5092 NP_290243.1 hypothetical protein Not tested LEE Protein 4e-50 85
ECs4540 NP_312567.1 hypothetical protein Not tested LEE Protein 4e-50 85
unnamed CAD42102.1 hypothetical protein Not tested PAI II 536 Protein 1e-50 84
unnamed CAD66208.1 hypothetical protein Not tested PAI III 536 Protein 4e-49 84
unnamed CAI43904.1 hypothetical protein Not tested LEE Protein 2e-48 83
z5092 CAD33790.1 Z5092 protein Not tested PAI I 536 Protein 1e-47 82
unnamed AAL57574.1 unknown Not tested LEE Protein 1e-41 81

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O3O_25350 YP_006781860.1 hypothetical protein VFG0664 Protein 2e-57 99
O3O_25350 YP_006781860.1 hypothetical protein VFG1070 Protein 2e-50 86
O3O_25350 YP_006781860.1 hypothetical protein VFG0787 Protein 1e-50 85
O3O_25350 YP_006781860.1 hypothetical protein VFG1621 Protein 6e-51 84
O3O_25350 YP_006781860.1 hypothetical protein VFG1683 Protein 2e-49 84
O3O_25350 YP_006781860.1 hypothetical protein VFG1531 Protein 6e-48 82