Gene Information

Name : O3O_09630 (O3O_09630)
Accession : YP_006784949.1
Strain : Escherichia coli 2009EL-2071
Genome accession: NC_018661
Putative virulence/resistance : Unknown
Product : UvrD/REP helicase-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3235517 - 3237736 bp
Length : 2220 bp
Strand : -
Note : COG1112 Superfamily I DNA and RNA helicases and helicase subunits

DNA sequence :
TTGCATGCATACTGTTCAGGACAGAGTAAAAAACGTGATTCGCCATGGGGTTTGATTTTTCCGTTTGGTCTTAATGAAAG
TCAGTTGCTGGCTGTCGAACGGGCATTTTCCTCACAGATTTCAGTTATTGAAGGACCACCTGGAACAGGTAAAACACAGA
CTATACTCAATATTGTTGCTAATATATTAATTCAGAATAAAACAGTGGCAATTTTGTCCAATAATAACTCAGCTGTCAGT
AATGTTTATGAAAAGATGGACAAACAGCAACTGGGATATGTGGTGGCACGACTGGGGAGTACGGAGAACAGGCAACAGTT
TTTTTCAACGTCGATTTCGCGTTCTGAGGAAGTCTTACCTGACTCACCGTCTGCAAATGCGATTGATGATGTACTTCAAC
AAGTGAAAAAACACCTGAATGCCATTAACCAGGTCGCTTCGTTAAAAGCAGAAATTAATGAGCTGAATATTGAGTATAAA
TATCTGCAGCAATGGCAGAGTCAGAATCTTCGACCGGAGGAGCTTTTTTCTCACAAATACCGATTTTCCTCACAAAAAAC
AACCGACCTGATGGCTTATATTCATTACCTTTCTGACAGGCGGATTGGATTCAGAAACAGAATTGATTTGTTGTTAAACT
TCAGGATACTGAAAGTCAAACCATTGATGATTCCGGAGAGAAGGCTGGCACTATTTACTTCTCTTCAGCTTTCTTATTAT
GAAAAAACTATTCGGGAAAAACAAATTTCTCTGAATGAATATGAGGAAGTATTTAAAAAATCTGATTTTAAAATTTTACT
GGGGCGCCTGACATCATGGTCTATGCTTTATTTAAAGCAACATCTGCGAAGAAATGTTTCAACAAGAAGTTCATTCTCGG
CAGAGACATACAGAGATGAATTTGACCGTTTTATAAAGCGTTTTCCGGTTATTGGTAGCAGTACGCATTCGATTATTAAC
TCTATCGGCAAGGGGGCCCTTCTTGATTATGTTATTATTGATGAAGCCTCGCAGCAGGATATTGTTCCGGGCATTCTGGG
ACTGGGATGTGCCCGTAATGTAATCGTTGTAGGGGATCGTAAGCAACTTCCACATGTTCCTGTATTACTCCCGAACAGCC
CATCTCCACCGGCAGAATACTATAATTGTGAGAAATATAGTCTACTTGATTCGGTTTGTATGTTGTTCAGGAACATGGTG
CCAGTAACCCTTCTTAAAGAGCATTATCGTTGTCATCCTAAAATCATTCAATTTTGTAATAAGCAGTTTTATGATAATGC
TCTGATACCGTTAACGGTTGATTCCGGTGAAGCCTCATTATCTCTGGTCATCACGGCAAAAGGAAACCATACCCGTAATT
TTTCAAATCTCAGGGAGCTTGAATCTCTGGAAGGTCATTACTGGGATGAAGAAAGTAGCAGGGGATACATTGCCCCATAT
AATGCACAGGTTAATCTGGCTGAAAAAGTGCTGCCTGCTGATTTTGTGAAATCGACGGTGCATAAATTTCAGGGACGGGA
GTGCGATGAAATTGTGTTTTCCACTGTGCTGGATAAGAAGCGCAGCAGCCAGCACAGTCGGAACATCGCGTTTGTTGATA
ATCCTGAACTGGTGAATGTCGCTGTTTCAAGGGCCCGAAATAAATTTACACTGGTGACTGGTAATGATGTATTTGAACGC
CACGCTGGACATATTGCGGCGCTGATTCGTTACATCAAATACTACGCTGATGACGGAGAGGTTTTCGAGAGCCCGGTCAT
ATCAGCATTTGATTTGCTGTACAGTGAGTATGACAAATCACTGGAACGACTGAATAGTAGATTGAATTCAAATGATTCAC
ACTTTAAGTCAGAACAGATTGTGGCCTGCCTGTTGCGGGATATCCTGTCGCAGGATAGTTATCGGAGTATGATGTTTCAT
TCACAAATAGCGCTGAATCAGTTGGTGTTGCTGGAGCGGGGGGATTTTACACACCGTGAACAGTTATTCATGCGTAACCG
GGCCAGTTGTGACTTTGTTGTTTACTATAAGGTCGGGAAGACTCCATTAGGGGTTATTGAAGTGGATGGAGGTTATCATC
TGACCAGTGTTCAGGCTGAACGTGATGAACTTAAAAACAGTATACTGAAGAAATGCGGCCTGCCATTGCTAAGATTACGT
ACTATAGACAGTGATATAGAAGGGAAGTTGGGAGCGTTTCTGTCAGGCCTGACAGGCTAA

Protein sequence :
MHAYCSGQSKKRDSPWGLIFPFGLNESQLLAVERAFSSQISVIEGPPGTGKTQTILNIVANILIQNKTVAILSNNNSAVS
NVYEKMDKQQLGYVVARLGSTENRQQFFSTSISRSEEVLPDSPSANAIDDVLQQVKKHLNAINQVASLKAEINELNIEYK
YLQQWQSQNLRPEELFSHKYRFSSQKTTDLMAYIHYLSDRRIGFRNRIDLLLNFRILKVKPLMIPERRLALFTSLQLSYY
EKTIREKQISLNEYEEVFKKSDFKILLGRLTSWSMLYLKQHLRRNVSTRSSFSAETYRDEFDRFIKRFPVIGSSTHSIIN
SIGKGALLDYVIIDEASQQDIVPGILGLGCARNVIVVGDRKQLPHVPVLLPNSPSPPAEYYNCEKYSLLDSVCMLFRNMV
PVTLLKEHYRCHPKIIQFCNKQFYDNALIPLTVDSGEASLSLVITAKGNHTRNFSNLRELESLEGHYWDEESSRGYIAPY
NAQVNLAEKVLPADFVKSTVHKFQGRECDEIVFSTVLDKKRSSQHSRNIAFVDNPELVNVAVSRARNKFTLVTGNDVFER
HAGHIAALIRYIKYYADDGEVFESPVISAFDLLYSEYDKSLERLNSRLNSNDSHFKSEQIVACLLRDILSQDSYRSMMFH
SQIALNQLVLLERGDFTHREQLFMRNRASCDFVVYYKVGKTPLGVIEVDGGYHLTSVQAERDELKNSILKKCGLPLLRLR
TIDSDIEGKLGAFLSGLTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1202 NP_286737.1 hypothetical protein Not tested TAI Protein 0.0 99
Z1642 NP_287145.1 hypothetical protein Not tested TAI Protein 0.0 99
S15 AAQ19138.1 putative UvrD/REP helicase-like protein Not tested PAI I CL3 Protein 0.0 99
uvrD2 ADD91734.1 putative UvrD/REP helicase-like protein Not tested PAI-I AL862 Protein 0.0 99