Gene Information

Name : lolD (O3O_10325)
Accession : YP_006784813.1
Strain : Escherichia coli 2009EL-2071
Genome accession: NC_018661
Putative virulence/resistance : Resistance
Product : lipoprotein transporter ATP-binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3107916 - 3108617 bp
Length : 702 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGAAGGCAGTGTGCAAACCGATGTACTGCACAA
TGTCAGTTTCAGCGTGGGCGAAGGTGAAATGATGGCGATCGTCGGTAGCTCTGGTTCCGGTAAAAGTACCTTGCTGCACC
TGCTGGGCGGGCTGGATACACCAACCTCCGGCGATGTGATCTTTAACGGTCAACCGATGAGCAAACTGTCTTCGGCGGCG
AAAGCAGAACTGCGCAACCAGAAGCTGGGCTTTATTTATCAGTTTCACCACCTGCTGCCGGATTTTACTGCCCTGGAAAA
CGTGGCTATGCCACTGCTGATTGGCAAGAAAAAGCCCGCTGAAATCAACAGCCGTGCGCTGGAGATGTTAAAAGCGGTGG
GGCTGGAGCATCGTGCGAATCACCGCCCATCTGAACTTTCTGGCGGCGAACGCCAGCGTGTGGCGATTGCCCGTGCGCTG
GTCAATAATCCGCGTCTGGTACTTGCGGATGAGCCTACCGGTAACCTCGATGCGCGTAACGCCGACAGCATCTTCCAGTT
GCTTGGGGAATTGAATCGCTTGCAGGGCACCGCCTTCCTGGTGGTTACTCACGACCTGCAACTGGCGAAACGTATGAGCC
GCCAATTGGAAATGCGTGATGGACGTCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAA

Protein sequence : 
MNKILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAA
KAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLKAVGLEHRANHRPSELSGGERQRVAIARAL
VNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELSLMGAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-28 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-28 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_006784813.1 lipoprotein transporter ATP-binding subunit NC_008702.1.4606598. Protein 2e-37 49
lolD YP_006784813.1 lipoprotein transporter ATP-binding subunit NC_012469.1.7686878. Protein 4e-41 45
lolD YP_006784813.1 lipoprotein transporter ATP-binding subunit CP001581.1.gene798.p Protein 6e-37 41