Gene Information

Name : O3O_25120 (O3O_25120)
Accession : YP_006781906.1
Strain : Escherichia coli 2009EL-2071
Genome accession: NC_018661
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 84905 - 86089 bp
Length : 1185 bp
Strand : -
Note : COG0582 Integrase

DNA sequence :
ATGGCATTAACCGATATCAAAGTGAAAACCGCAAAACCCAAAGACAAACCCTATAAGCTTGCTGATGGCGGCGGTATGTA
TCTACTGATTAACACTAATGGTTCTAAATACTGGCGCATGAAGTACCGCTTTGCTGGTAAAGAAAAGATGCTTTCTATTG
GCGTATACCCCGATGTAACGTTAGCCGATGCTCGCGAGAAACGCAGTGAAGCCAGGAAACTCCTCGCTGCTGGAGGCGAT
CCAGGGGAGGCAAAAAAGGAAGAAAAAATCGCGCAGCAAATGAGTCTGAAAAATACGTTCGAGGCTATTGCTCGCGAATG
GCACCAGTCAAAAGCTGATCGGTGGTCATTACGCTATCGTGATGAAATCATTGATACCTTTGAAAAAGACATTTTTCCCT
ACATTGGCAAGCGCCCTATTGCCGAAATCAAACCAATGGAGTTACTGGAAGCACTACGTAAAATGGAAAAACGTGGAGCT
CTGGAGAAAATGCGCAAGGTCCGCCAGCGCTGTGGTGAGGTGTTCCGCTATGCAATTGTTACTGGCCGGGCAGACTATAA
CCCAGCCCCCGATCTTGCCAGTGCTTTAGCTACACCGAAAAAAGTACATTTTCCCTTTCTTACTGCTAATGAACTTCCCC
ACTTCCTCAACGATCTGGCGGGTTATACCGGAAGTATAATCACTAAGACAGCTACTCAGATCATTATGTTAACCGGCGTA
CGAACACAAGAACTGCGTTTTGCACGCTGGGAAGATATCGATTTTGAGACAAAATTGTGGGAGATCCCGGCAGAAGTAAT
GAAGATGAAGCGACCTCATATTGTGCCGCTCTCTGAGCAGGTCATTATGCTATTTAAGCAGCTTGAACCAATCTCAAAAC
ATCATCCCCTAGTCTTTATCGGTAGAAATGATCCCCGCAAACCAATTAGTAAGGAAAGCATTAACCAAGTAATTGAATTA
CTTGGATATAAGGGAAGACTCACAGGGCACGGTTTCAGACACACCATGAGTACAATTCTGCATGAACAAGGCTTTAATTC
CGCCTGGATTGAAATGCAGTTAGCTCATGTGGATAAAAATTCCATCAGGGGTACCTATAATCATGCCCTGTATCTCGATG
GCCGCCGTGAAATGATGCAATGGTACGCTGATTACATTGATTCACTCTCCAGCCGGGAAAGTTAA

Protein sequence :
MALTDIKVKTAKPKDKPYKLADGGGMYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKLLAAGGD
PGEAKKEEKIAQQMSLKNTFEAIAREWHQSKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGA
LEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGV
RTQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFIGRNDPRKPISKESINQVIEL
LGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNSIRGTYNHALYLDGRREMMQWYADYIDSLSSRES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
int CAC39282.1 integrase Not tested LPA Protein 0.0 100
int AAD44730.1 Int Not tested SHI-2 Protein 0.0 99
aec33 AAW51716.1 Int Not tested AGI-3 Protein 0.0 99
S4835 NP_839238.1 integrase Not tested SHI-2 Protein 0.0 99
SF3698 NP_709437.1 integrase Not tested SHI-2 Protein 0.0 99
int AAD54663.1 Sai integrase Not tested SHI-2 Protein 0.0 99
intL NP_290239.1 integrase for prophage 933L and the LEE pathogenicity island Not tested LEE Protein 0.0 97
ECs4534 NP_312561.1 integrase Not tested LEE Protein 0.0 97
int AAC31482.1 CP4-like integrase Not tested LEE Protein 0.0 97
int ACU09430.1 integrase Not tested LEE Protein 0.0 97
ESA_03025 YP_001439090.1 hypothetical protein Not tested Not named Protein 1e-124 63
unnamed AFX83955.1 integrase Not tested SE-PAI Protein 1e-127 63
STY4821 NP_458899.1 integrase Not tested SPI-10 Protein 1e-75 44
SESS1296_03598 AFO66301.1 bacteriophage integrase Not tested SESS LEE Protein 4e-81 44
SESS1635_03816 AFO66367.1 bacteriophage integrase Not tested SESS LEE Protein 4e-81 44
int-phe AAL60261.1 Int-phe Not tested LEE Protein 2e-84 42
int AAL51003.1 CP4-like integrase Not tested LEE Protein 2e-83 42
int AAT48697.1 CP4-like integrase Not tested PAI I 4787 Protein 1e-83 42
ECO103_3550 YP_003223418.1 integrase Not tested LEE Protein 3e-84 42
intP4 CAE85151.1 CP4 integrase protein Not tested PAI V 536 Protein 5e-84 42
ECO26_5300 YP_003232178.1 integrase Not tested LEE Protein 3e-84 42
int AAK16198.1 Int Not tested PAI-I AL862 Protein 3e-84 42
int ADD91747.1 P4 integrase Not tested PAI-I AL862 Protein 3e-84 42
int-phe AAL57571.1 CP4-like integrase Not tested LEE Protein 2e-84 42
int AAL51028.1 CP4-like integrase Not tested LEE Protein 2e-84 42
Z4313 NP_289539.1 pathogenicity island integrase Not tested OI-122 Protein 1e-83 42
ECO111_3718 YP_003236059.1 putative integrase Not tested LEE Protein 2e-82 42
c5216 NP_757064.1 prophage P4 integrase Not tested PAI II CFT073 Protein 4e-84 42
ORF_1 AAZ04412.1 phage integrase Not tested PAI I APEC-O1 Protein 1e-83 42
S4822 NP_838459.1 P4-type integrase Not tested SHI-1 Protein 2e-84 42
SF2964 NP_708738.1 P4-type integrase Not tested SHI-1 Protein 2e-84 42
APECO1_3534 YP_854214.1 P4-like integrase Not tested PAI I APEC-O1 Protein 2e-83 42
c3556 NP_755431.1 prophage P4 integrase Not tested PAI I CFT073 Protein 4e-84 42
ECUMN_3322 YP_002414004.1 integrase Not tested Not named Protein 2e-84 42
int AAK00456.1 Int Not tested SHI-1 Protein 5e-75 41
intB CAD42017.1 bacteriophage P4 integrase Not tested PAI II 536 Protein 6e-76 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O3O_25120 YP_006781906.1 hypothetical protein VFG0598 Protein 0.0 99
O3O_25120 YP_006781906.1 hypothetical protein VFG0783 Protein 0.0 97
O3O_25120 YP_006781906.1 hypothetical protein VFG0626 Protein 8e-85 42
O3O_25120 YP_006781906.1 hypothetical protein VFG1693 Protein 2e-84 42
O3O_25120 YP_006781906.1 hypothetical protein VFG1536 Protein 3e-76 41