Gene Information

Name : O3K_25677 (O3K_25677)
Accession : YP_006781733.1
Strain :
Genome accession: NC_018659
Putative virulence/resistance : Virulence
Product : shufflon protein A
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 20844 - 22280 bp
Length : 1437 bp
Strand : -
Note : -

DNA sequence :
ATGGGTAATCTGATGAAAAAATATGACCGAGGCTGGGCATCGCTGGAAATTGGCGCGGCTTTATTGATTGTTATGATCAT
AGTTGCCTGGGGAGCAGGCATATGGCAGGACTATTTAAAAACCAAAGGTTGGCAGGCTGAAGCTCGTCTTGTCAGCAACT
GGGCCAGTGCAGCCCGCTCTTATATAGGGAAAAACTACACAACTCTCCAGGCAAGTAGTACCACATCAACCCCTGCCGTT
ATCACGACAACCATGCTGAAAAATACCGGCTTTTTGTCCAGCGGCTTTATTGAGACAAACAGCGAGGGGCAGCGGTTACA
GGCATATGTAGTTCGAAACGCCCAAAACCCGGAATTACTACAGGCAATGGTTGTATCCAGTGGTGGCACCCCTTATCCAG
TGAAAGCACTTATCCAGATGGCTAAGGATATTACCACTGGTCTTGGTGGATATATCCAGGACGGCAAAACAGCCACAGGT
GCATTACGTTCCTGGTCAGTAGCTTTAAGTAATTATGGTGCCAAAAGCGGTAACGGGCATATTGCCGTACTGTTATCGAC
AGATGAACTTAGTGGTGCAGCAGAGGACACTGATCGTCTTTACAGATTCCAGGTCAATGGTCGCCCTGACTTAAACAAAA
TGCACACGGCCATTGATATGGGATCAAATAACCTGAATAACATTGGGGCAGTAAATGCCCAGACTGGTAATTTCAGCGGC
AATGTGAATGGTGTAAATGGCACTTTCAGCGGTCAGGTAAAAGGCAATAGCGGAAACTTTGACGTAAATGTCACCGCTGG
CGGTGATATCAGAAGTAATAATGGTTGGTTAATTACTCGTAACAGCAAAGGCTGGCTCAATGAAACTCACGGTGGCGGAT
TTTATATGTCCGACGGATCATGGGTTCGAAGTGTAAACAACAAAGGCATCTATACCGGCGGTCAGGTGAAAGGCGGTACT
GTTCGGGCTGATGGTCGCCTTTATACTGGTGAATACTTACAACTGGAAAGAACTGCCGTTGCTGGCGCATCATGTTCGCC
TAACGGCCTTGTAGGCCGCGATAATACAGGGGCAATACTTTCGTGCCAATCCGGTACGTGGAAGACTTCTGGTTCGCTCA
ATGGTTCTTACACAAACTTAGGTTCACATAGAGGTTCATTCTCAGGGCGGAATTCAGGGGGCAGTACATTGTTTATTTAT
GCATCTGGAGGTAATGGAGGATCTGCCGGAGGTGCATGTGCAAATACATCCCGACTGCAGGGATATGTTGGTGGGACGCT
AATTAGCGTGAATGCCAGTAATAACCCTGCATATGGAAAAACAGCCTTTATCAGCTTTGCTGTACCTGCAGGTACTTCCT
ATCAGATAACATCCTATCCAACAGAAAATACATCATGTGGTGCCGGGGTATTTTCAGTATTTGGATATCAAACTTAA

Protein sequence :
MGNLMKKYDRGWASLEIGAALLIVMIIVAWGAGIWQDYLKTKGWQAEARLVSNWASAARSYIGKNYTTLQASSTTSTPAV
ITTTMLKNTGFLSSGFIETNSEGQRLQAYVVRNAQNPELLQAMVVSSGGTPYPVKALIQMAKDITTGLGGYIQDGKTATG
ALRSWSVALSNYGAKSGNGHIAVLLSTDELSGAAEDTDRLYRFQVNGRPDLNKMHTAIDMGSNNLNNIGAVNAQTGNFSG
NVNGVNGTFSGQVKGNSGNFDVNVTAGGDIRSNNGWLITRNSKGWLNETHGGGFYMSDGSWVRSVNNKGIYTGGQVKGGT
VRADGRLYTGEYLQLERTAVAGASCSPNGLVGRDNTGAILSCQSGTWKTSGSLNGSYTNLGSHRGSFSGRNSGGSTLFIY
ASGGNGGSAGGACANTSRLQGYVGGTLISVNASNNPAYGKTAFISFAVPAGTSYQITSYPTENTSCGAGVFSVFGYQT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pilV AAC38069.1 PilV Virulence SPI-7 Protein 1e-85 55
pilV NP_458638.1 prepilin Virulence SPI-7 Protein 2e-85 55
pilV NP_807849.1 prepilin Virulence SPI-7 Protein 2e-85 55
YE3498 YP_001007659.1 putative type IV pilus protein Virulence YAPI Protein 1e-81 54
YpsIP31758_3727 YP_001402681.1 shufflon protein Not tested YAPI Protein 4e-82 53
pilV CAF28494.1 secondary type IV prepilin Virulence YAPI Protein 4e-81 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O3K_25677 YP_006781733.1 shufflon protein A VFG2317 Protein 5e-82 54