Gene Information

Name : O3K_04500 (O3K_04500)
Accession : YP_006777622.1
Strain : Escherichia coli 2011C-3493
Genome accession: NC_018658
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 916969 - 917367 bp
Length : 399 bp
Strand : -
Note : COG3436 Transposase and inactivated derivatives

DNA sequence :
ATGCAGAGTAAACCGCTACTGACTTCCCTGTATAAGCTGATGCAGGAGAAAGAACACACGTTATCGAAAAAATGCCGTCT
GAGAGATGCGTTCCGGTATATCAGGAAGCACTGGGTTGCGTTGTGCAACTTCTGTGATGACGGTCTGGCGGAGGCGGACA
ATAACACAGCGGAAAGAGCGCTTCGTGCAGTCTGTCTCGGAAAGAAAAATTACGTGTTCTTCGGTAGCGATCACGGCGGC
GAGCGTGGTGCACTGTTGTACGGGCTGATCGGCACCTGCCGGTTGAATGGTATCGATCCGGAAGCGTATCTGCGCCATAT
CCTGAGCGTACTGCCGGAATGGCCTTCCAACCGAGTTGACGAACTCCTGCCATGGAACGTAGTACTCACTAATAAATAA

Protein sequence :
MQSKPLLTSLYKLMQEKEHTLSKKCRLRDAFRYIRKHWVALCNFCDDGLAEADNNTAERALRAVCLGKKNYVFFGSDHGG
ERGALLYGLIGTCRLNGIDPEAYLRHILSVLPEWPSNRVDELLPWNVVLTNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42054.1 hypothetical protein Not tested PAI II 536 Protein 5e-31 64
SF2970 NP_708744.1 hypothetical protein Not tested SHI-1 Protein 3e-32 61
unnamed AAK00461.1 unknown Not tested SHI-1 Protein 2e-32 61
l0015 CAD33721.1 putative IS protein Not tested PAI I 536 Protein 1e-36 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O3K_04500 YP_006777622.1 transposase VFG1573 Protein 2e-31 64
O3K_04500 YP_006777622.1 transposase VFG0632 Protein 8e-33 61
O3K_04500 YP_006777622.1 transposase VFG1462 Protein 5e-37 60