Name : O3K_04160 (O3K_04160) Accession : YP_006777562.1 Strain : Escherichia coli 2011C-3493 Genome accession: NC_018658 Putative virulence/resistance : Virulence Product : putative general secretion pathway protein YghD Function : - COG functional category : - COG ID : - EC number : - Position : 855900 - 856436 bp Length : 537 bp Strand : + Note : COG3149 Type II secretory pathway, component PulM DNA sequence : ATGTTACGCGATAAATTTATTCACTATTTTCAGCAATGGCGTGAACGCCAGTTAAGCCGTGGCGAACACTGGCTGGCACA ACACCTGGCGGGGCGTTCTCCGCGTGAAAAGGGCATGTTACTGGCAGCGGTGGTGTTCCTGTTTAGCGTCGGATATTACG TCCTCATCTGGCAGCCGTTGAGCGAACGGATAGAACAACAGGAGACAATGTTGCAGCAACTGGTGGCGATGAACACCAGA CTGAGGAGCGCCGCGCCGGATATTATGGCGGCGCGAAAATCCGCCACAACAACGCCTGCGCAGGTATCGCGGGTTATCAG TGACAGCGCTTCCGCGCACTCGGTAGTCATCAAGCGGATAGCCGAGCGTGGGGAGAATATTCAGGTCTGGATAGATCCGG TGGTGTTTAATGACCTGCTGAACTGGTTAAACGCGCTGGATGAAAAGTATGCGCTGCGGGTGACACAAATTGATGCCAGT GCTGCTGAGAAGACTGGGATGGTGAATGTGCAGCGGCTGGAGTTTGGACGGGGGTAA Protein sequence : MLRDKFIHYFQQWRERQLSRGEHWLAQHLAGRSPREKGMLLAAVVFLFSVGYYVLIWQPLSERIEQQETMLQQLVAMNTR LRSAAPDIMAARKSATTTPAQVSRVISDSASAHSVVIKRIAERGENIQVWIDPVVFNDLLNWLNALDEKYALRVTQIDAS AAEKTGMVNVQRLEFGRG |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
yghD | CAI43907.1 | putative secretion pathway protein | Not tested | LEE | Protein | 2e-78 | 97 |
gspM | CAE85225.1 | GspM, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-77 | 95 |
gspM | YP_854398.1 | general secretion pathway protein YghD | Not tested | PAI I APEC-O1 | Protein | 5e-77 | 95 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
O3K_04160 | YP_006777562.1 | putative general secretion pathway protein YghD | VFG2056 | Protein | 4e-56 | 93 |