Gene Information

Name : O3K_03410 (O3K_03410)
Accession : YP_006777412.1
Strain : Escherichia coli 2011C-3493
Genome accession: NC_018658
Putative virulence/resistance : Unknown
Product : IS1 transposase InsAB'
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 696035 - 696538 bp
Length : 504 bp
Strand : -
Note : COG1662 Transposase and inactivated derivatives, IS1 family

DNA sequence :
ATGCCGGGCAACAGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTCCGCCATTTAAAAAACTCAGGCCGCAGTCGGT
AACCTCGCGCATACAGCCGGGCAGTGACGTCATCGTCTGCGCGGAAATGGACGAACAGTGGGGATACGTCGGGGCTAAAT
CGCGCCAGCGCTGGCTGTTTTACGCGTATGACAGGCTCCGGAAGACGGTTGTTGCGCACGTATTCGGTGAACGCACTATG
GCGACGCTGGGGCGTCTTATGAGCCTGCTGTCACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGA
ATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGC
AGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTAT
CTGAACATAAAACACTATCAATAA

Protein sequence :
MPGNSPHYGRWPQHDFPPFKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTM
ATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHY
LNIKHYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EC042_4085 YP_006098368.1 transposase Not tested Tn2411 Protein 3e-77 99
EC042_4113 YP_006098397.1 transposase Not tested Tn2411 Protein 3e-77 99
insB NP_458736.1 insertion element IS1 protein InsB Not tested SPI-7 Protein 3e-77 99
InsB (Tn1) CAJ77072.1 Transposase Not tested AbaR1 Protein 1e-74 99
insB ADD91744.1 transposase Not tested PAI-I AL862 Protein 9e-76 96
insB NP_709463.1 IS1 ORF2 Not tested SHI-2 Protein 6e-56 92
Z1192 NP_286727.1 IS1 protein InsB Not tested TAI Protein 1e-71 90
Z1632 NP_287135.1 IS1 protein InsB Not tested TAI Protein 1e-71 90
tnpH AAD44742.1 TnpH Not tested SHI-2 Protein 5e-71 89
S4059 NP_839227.1 IS1 orfB Not tested SHI-2 Protein 7e-71 89
insB NP_709451.1 IS1 ORF2 Not tested SHI-2 Protein 4e-69 88
aec38 AAW51721.1 InsB Not tested AGI-3 Protein 3e-56 88

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O3K_03410 YP_006777412.1 IS1 transposase InsAB' VFG0612 Protein 1e-69 88