Gene Information

Name : O3K_00250 (O3K_00250)
Accession : YP_006776786.1
Strain : Escherichia coli 2011C-3493
Genome accession: NC_018658
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 47735 - 48580 bp
Length : 846 bp
Strand : -
Note : -

DNA sequence :
ATGTCTGCAATCACAGTCTCCCGTCCGGAAGTGGTCAACGGGCATACGGACGTTATCTGCTCCACCTCAGTCAGCCACAT
TCTGGCTGTGCGAAAGACTACACTGCTGCAAATCGACACACTTATCCGGCAACTGGCTGAAATCTCATCAATGACAGAAA
GTATTGGAGGTAAAACTTCTCTGGACTGGGCCATGAAACAGGATTTTCGCTGTGGCTGCTGGCTCATGGAGAAACCGGAA
ACCGCAATGAAAGCCATCACCCGCAATCTTGACCGCGAAATCTGGCGTGACCTGATGCAACGTTCCGGGATGCTGTCATT
AATGGATGCGCAGGCCCGTGATACATGGTACCGCTCACTGGAGTACGATAACTTTCCGGAAATCAGTGAAGCGAACATTT
GGAGCACATTTGAGCAACTGCACCAGAATAAGGATGAAGTGTTTGAGCGAGGAGTGATCAACGTCTTCAGAGGGCTGAGC
TGGAATTACAAAACCAACTCCCCCTGTAAATTTGGCAGTAAAATTATCGTCAACAATCTGGTGAGGGGGGACCGGTGGGG
ATTGCATCTTATCACCGGGCAACAGGCAGATCGACTCGCCGACCTGGAAAGAATGCTGTATCTGTTCAGTGGCAAACCAA
TCCCTGACAACCGGGAAAATATCATCATTCGGCTGGATGATCACATCCGCTCCGTTCAGGGCAAAGCGTGCTATGAAGAT
GAGATGTTCAACATCAGATACTTTAAGAAGGGCTCCGCACACATCACGTTCAGGAAACCAGAACTGGTTGATCGGCTAAA
TGATATTATTGCCAGGCACTATTCGGAAATGTTACCTTCATTATAA

Protein sequence :
MSAITVSRPEVVNGHTDVICSTSVSHILAVRKTTLLQIDTLIRQLAEISSMTESIGGKTSLDWAMKQDFRCGCWLMEKPE
TAMKAITRNLDREIWRDLMQRSGMLSLMDAQARDTWYRSLEYDNFPEISEANIWSTFEQLHQNKDEVFERGVINVFRGLS
WNYKTNSPCKFGSKIIVNNLVRGDRWGLHLITGQQADRLADLERMLYLFSGKPIPDNRENIIIRLDDHIRSVQGKACYED
EMFNIRYFKKGSAHITFRKPELVDRLNDIIARHYSEMLPSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
z1226 CAD33792.1 Z1226 protein Not tested PAI I 536 Protein 5e-120 91
Z1226 NP_286760.1 hypothetical protein Not tested TAI Protein 1e-118 91
Z1664 NP_287166.1 hypothetical protein Not tested TAI Protein 1e-118 91
unnamed AAL57572.1 unknown Not tested LEE Protein 9e-116 90
ECO103_3595 YP_003223452.1 hypothetical protein Not tested LEE Protein 1e-114 89
unnamed CAI43906.1 hypothetical protein Not tested LEE Protein 9e-115 89
unnamed CAE85207.1 hypothetical protein Not tested PAI V 536 Protein 9e-116 88
aec79 AAW51762.1 Aec79 Not tested AGI-3 Protein 1e-116 88
APECO1_3484 YP_854327.1 hypothetical protein Not tested PAI I APEC-O1 Protein 6e-117 87
ORF_49 AAZ04463.1 hypothetical protein Not tested PAI I APEC-O1 Protein 4e-117 87
unnamed AAK00485.1 unknown Not tested SHI-1 Protein 1e-114 87
ECO111_3781 YP_003236116.1 hypothetical protein Not tested LEE Protein 2e-114 87
S3207 NP_838489.1 hypothetical protein Not tested SHI-1 Protein 1e-114 87
SF3002 NP_708776.1 hypothetical protein Not tested SHI-1 Protein 1e-114 87
unnamed CAD66210.1 hypothetical protein Not tested PAI III 536 Protein 2e-106 86

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O3K_00250 YP_006776786.1 hypothetical protein VFG1533 Protein 3e-120 91
O3K_00250 YP_006776786.1 hypothetical protein VFG0666 Protein 6e-115 87
O3K_00250 YP_006776786.1 hypothetical protein VFG1685 Protein 1e-106 86