Gene Information

Name : O3K_23015 (O3K_23015)
Accession : YP_006781257.1
Strain : Escherichia coli 2011C-3493
Genome accession: NC_018658
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4748355 - 4749758 bp
Length : 1404 bp
Strand : -
Note : COG3436 Transposase and inactivated derivatives

DNA sequence :
ATGCTGTTCGGAACCCGTTCTGAAAAACTGCGTCGTGAGGTTGAACAGGCTGAAGCCCTGCTGAAACAACGCGAGCAGGA
AAGCGATCGTTACAGTGGGCGTGAGGATGACCCGCTGGTTCCCCGCCAGTTGCGACAGTCGCGCCATCGTCGTCCGTTAC
CGGCACATCTCCCCCGTGAAATATACCGCCTGGAGCCTGAAGAAAGCTGTTGCCCGGAGTGTGGCGGTGAGCTGGATTAT
CTGGGGGAAGTCAGCGCAGAACAACTGGAACTGGTGAGCAGCGCCCTGAAAGTGATCCGCACAGAACGGGTAAAAAAAGC
CTGTACAAAATGTGACTGCATCGTTGAAGCACCGGCACCATCCCGTCCGATAGAGCGTGGTATCGCGGGCCCGGGGTTAC
TTGCCCGCGTGTTAACGGGAAAATACTGCGAACACCTGCCACTGTATCGTCAGAGTGAAATCTTTGCCCGCCAGGGTGTC
GAACTGAGCCGTGCCTTACTCTCCAACTGGGTTGATGCGTGCTGCCAGTTAATGACGCCGCTGAATGATGCCCTGTACAG
TTATGTGATGAACACCCGCAAGGTTCACACTGATGACACACCAGTAAAAGTACTGGCACCGGGCAGGAAGAAGGCGAAAA
CAGGATATATCTGGACGTATGTCCGGGATGACCGAAATGCCGGTTCGCCAGAACCTCCGGCGGTCTGGTTCGCCTACTCA
CCGGACCATCAGGGTAAACATCCGGAGCAACACCTTCGTCCCTTCCGGGGTATCCTGCAGGCAGATGCGTTCGCAGGTTA
CGATCGGCTGTTCAGTGCCGAACGTGAAGGCGGCGCGTTGACGGAAGCAGGATGCTGGGCTCATGCGCGGCGCAAAATCC
ACGATGTATATATCAGTACCAAAAGCGCGACGGCGGAAGAAGCACTGAAACTAATCGGCGAACTGTACGCCATTGAGCAC
GAAATACGCGGGTTGCCGGTGTCTGAACGCCTGGCGGTCAGGCAAATGCAGAGTAAACCGCTACTGACTTCCCTGTATAA
GCTGATGCAGGAGAAAGAACACACGTTATCGAAAAAATGCCGTCTGAGAGATGCGTTCCGGTATATCAGGAAGCACTGGG
TTGCGTTGTGCAACTTCTGTGATGACGGTCTGGCGGAGGCGGACAATAACACAGCGGAAAGAGCGCTTCGTGCAGTCTGT
CTCGGAAAGAAAAATTACGTGTTCTTCGGTAGCGATCACGGCGGCGAGCGTGGTGCACTGTTGTACGGGCTGATCGGCAC
CTGCCGGTTGAATGGTATCGATCCGGAAGCGTATCTGCGCCATATCCTGAGCGTACTGCCGGAATGGCCTTCCAACCGAG
TTGACGAACTCCTGCCATGGAACGTAGTACTCACTAATAAATAA

Protein sequence :
MLFGTRSEKLRREVEQAEALLKQREQESDRYSGREDDPLVPRQLRQSRHRRPLPAHLPREIYRLEPEESCCPECGGELDY
LGEVSAEQLELVSSALKVIRTERVKKACTKCDCIVEAPAPSRPIERGIAGPGLLARVLTGKYCEHLPLYRQSEIFARQGV
ELSRALLSNWVDACCQLMTPLNDALYSYVMNTRKVHTDDTPVKVLAPGRKKAKTGYIWTYVRDDRNAGSPEPPAVWFAYS
PDHQGKHPEQHLRPFRGILQADAFAGYDRLFSAEREGGALTEAGCWAHARRKIHDVYISTKSATAEEALKLIGELYAIEH
EIRGLPVSERLAVRQMQSKPLLTSLYKLMQEKEHTLSKKCRLRDAFRYIRKHWVALCNFCDDGLAEADNNTAERALRAVC
LGKKNYVFFGSDHGGERGALLYGLIGTCRLNGIDPEAYLRHILSVLPEWPSNRVDELLPWNVVLTNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 0.0 91
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 1e-179 90
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 1e-179 90
tnp AEA34687.1 IS66 family transposase Not tested Not named Protein 2e-120 85
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-120 66
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 1e-130 63
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 6e-132 63
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 4e-131 63
unnamed AAC31494.1 L0015 Not tested LEE Protein 6e-132 63
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 4e-131 63
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 8e-132 63
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 8e-132 63
tnp AEA34686.1 transposase Not tested Not named Protein 4e-131 63
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 4e-131 63
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 5e-131 63
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 3e-131 63
unnamed AAL57570.1 unknown Not tested LEE Protein 1e-131 63
unnamed AAL08460.1 unknown Not tested SRL Protein 2e-92 63
s0025 CAD33772.1 IS66-like transposase Not tested PAI I 536 Protein 3e-75 55
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 2e-101 54
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 2e-94 54
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 3e-88 54
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 3e-88 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O3K_23015 YP_006781257.1 transposase VFG1736 Protein 7e-175 99
O3K_23015 YP_006781257.1 transposase VFG1700 Protein 7e-121 66
O3K_23015 YP_006781257.1 transposase VFG0793 Protein 3e-132 63
O3K_23015 YP_006781257.1 transposase VFG1051 Protein 9e-93 63
O3K_23015 YP_006781257.1 transposase VFG1513 Protein 1e-75 55