Gene Information

Name : O3K_09725 (O3K_09725)
Accession : YP_006778642.1
Strain : Escherichia coli 2011C-3493
Genome accession: NC_018658
Putative virulence/resistance : Virulence
Product : yersiniabactin-iron transporter permease YbtX
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2049690 - 2050970 bp
Length : 1281 bp
Strand : +
Note : COG0477 Permeases of the major facilitator superfamily

DNA sequence :
ATGAGTGATGTTCAGTCGAATGTGAAACCGCTGACGTTGACGACCGGGCGGGTGATTTTTGCTATTGCCGGCGTCTATGT
GACGCAGAGTCTGGTATCGGCGCTGTCTATGCAGTCCTTACCCGCGCTGGTGCGCGCTGCTGGCGGTTCGCTGGCGCTTG
CCGGTGCGACAACCCTGTTTATGCTGCCCTGGGCGCTGAAGTTTATTTGGGCGTCGTGGATCGAGCGCTGGCGGCTTCCG
CCCGGTAGCCAGGAACGCCGTTCCCGCATGTTAATCCTGCGTGGTCAGGTCGCGCTAGCGGCGATCCTGACTATTGTCGC
AGCGATTGGCTGGTTTGGGCGAGAAGGGGGATTCCCCGATACGCAAATCGTCGCGTTATTTGTTCTGTTTATGGTGGCAG
GCACGGTCGCCTCCACCATTGATATCGCCAGCGACGGCTTTTGTGTCGATCAACTGACCCGCACGGGTTACGGCTGGGGA
AACAGCGTGCAGGTCGGCGGCAGCTATCTGGGAATGATGTGCGGCGGCGGGGTGTTCCTGATGCTGTCGGCGGCATCCGG
CTGGCCTGTCGCCATGCTGATGATGGCGGTGCTGATTATGGCGCTGTCACTCCCGCTGTGGCGCATTACGGAGCCGACGC
GAACAGCGACTATCCCGCATGTTCCGGCGTTAGGTTATGCGCTAAGGAGGAAGCAGGCTCGCCTGGGCTTACTGCTGGTA
TTGATGCTGAATTCAGGCATGCGGTTTGTGCTGCCTCTTCTGGCACCGCTGTTGTTGGATCATGGGTTGAGCATGTCCGC
ATTGGGCGCGCTGTTCAGCGGCGGCAATATTGCAGCGGGCATAGCAGGAACGCTGGCCGGCGGATTGCTGATGAAATACA
CCTCACCCGGCAGAGCGCTGTTGACGGCTTATGGCGTCCAGGGGATCGCGCTGCTGGCGGTGGTGATGACTCTCATGATG
GCGCCGGGTCATCTGCTGCTGCAGATTCTCCAGTGTCTGGTCCTTGTCCAGTCCATTTCGCTGGCCTGCGCGCTGGTCTG
TCTTTACGCCACGCTGATGTCGCTTTCATCGCCTTTGCAGGCCGGTGTCGACTTCACCCTCTTTCAATGTACTGATGCGG
CAATCGCCATTCTGGCAGGCGTTATCGGTGGCGTTGTTGCTCAACATTTTGGCTATGCGGCCTGCTTCCTGTTTGCCGGG
GCATTCACGTTGCTGGCGGCGTGGGTTGCTTATATCCGGCTGCATTCGGCAAGAGAACTGATGACAAGCGCAATTGATTG
A

Protein sequence :
MSDVQSNVKPLTLTTGRVIFAIAGVYVTQSLVSALSMQSLPALVRAAGGSLALAGATTLFMLPWALKFIWASWIERWRLP
PGSQERRSRMLILRGQVALAAILTIVAAIGWFGREGGFPDTQIVALFVLFMVAGTVASTIDIASDGFCVDQLTRTGYGWG
NSVQVGGSYLGMMCGGGVFLMLSAASGWPVAMLMMAVLIMALSLPLWRITEPTRTATIPHVPALGYALRRKQARLGLLLV
LMLNSGMRFVLPLLAPLLLDHGLSMSALGALFSGGNIAAGIAGTLAGGLLMKYTSPGRALLTAYGVQGIALLAVVMTLMM
APGHLLLQILQCLVLVQSISLACALVCLYATLMSLSSPLQAGVDFTLFQCTDAAIAILAGVIGGVVAQHFGYAACFLFAG
AFTLLAAWVAYIRLHSARELMTSAID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
irp8 YP_002346906.1 signal transducer Not tested HPI Protein 1e-120 99
ybtX YP_070128.1 MFS superfamily transporter signal transducer Virulence HPI Protein 1e-120 99
ybtX YP_853071.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 4e-120 99
ybtX CAA21386.1 - Virulence HPI Protein 7e-120 99
ybtX NP_993011.1 signal transducer Virulence HPI Protein 5e-120 99
ybtX NP_669702.1 hypothetical protein Virulence HPI Protein 5e-120 99
irp8 YP_001006811.1 putative signal transducer Not tested HPI Protein 2e-118 98
irp8 CAB46571.1 signal transducer, Irp8 Virulence HPI Protein 2e-117 98