Gene Information

Name : O3K_05215 (O3K_05215)
Accession : YP_006777759.1
Strain : Escherichia coli 2011C-3493
Genome accession: NC_018658
Putative virulence/resistance : Virulence
Product : type III secretion system lipoprotein EprK
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1068505 - 1069239 bp
Length : 735 bp
Strand : +
Note : COG4669 Type III secretory pathway, lipoprotein EscJ

DNA sequence :
ATGAAATATATATCATTATTATTGTTTATCCTGCTGTTGTGCGGCTGCAAGCAGCAGGAATTATTGAACCATCTTGATCA
ACAGCAAGCTAATGATGTCCTTGCTGTTTTACAAAGACATAATATTAATGCTGAAAAGAAGGATCAAGGCAAAACAGGAT
TTTCAATATTTGTCGAACCAACGGATTTTGCTTCTGCGGTGGATTGGCTAAAAATCTACAATCTACCGGGTAAGCCTGAT
ATTCAAATATCGCAGATGTTCCCTGCAGATGCACTCGTTTCATCTCCACGAGCGGAAAAAGCAAGGCTATATTCTGCTAT
TGAGCAGCGGTTAGAGCAATCTCTCAAAATTATGGATGGCATTATTTCTTCGAGAGTACATGTTAGTTACGATGTTGATA
ATGGCGATAGTGGTAAAACTGCTTTACCAATTCATATTTCTGTACTTGCAGTATATGAAAAAGATATCAACCCAGAAATA
AAAATAAATGATATCAAGAGATTTATTGTTAATAGCTCTGCAAGCGTACAATATGAAAATATTTCTGTTGTATTGTCAAA
ACGAAGAGACATTATTGAGCAAGCACCAACATATGAAATTAGCGAACCTGTTTTTGCTTATGATAAGGCTATGCCGGTTT
CTATCTTACTTGCATTAATATCCGTAGCGACTTGCTGGCTGTTATGGAAGTATAGGGCCATTCTAACTAATTTAGTCAGG
TTGAAAATTAAGTAG

Protein sequence :
MKYISLLLFILLLCGCKQQELLNHLDQQQANDVLAVLQRHNINAEKKDQGKTGFSIFVEPTDFASAVDWLKIYNLPGKPD
IQISQMFPADALVSSPRAEKARLYSAIEQRLEQSLKIMDGIISSRVHVSYDVDNGDSGKTALPIHISVLAVYEKDINPEI
KINDIKRFIVNSSASVQYENISVVLSKRRDIIEQAPTYEISEPVFAYDKAMPVSILLALISVATCWLLWKYRAILTNLVR
LKIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
eprK AAZ31284.1 EprK Virulence ETT2 Protein 2e-106 100
ECs3716 NP_311743.1 EprK Not tested LIM Protein 6e-105 99
prgK YP_217790.1 cell invasion protein Virulence SPI-1 Protein 4e-53 55
prgK NP_461792.1 needle complex inner membrane lipoprotein Virulence SPI-1 Protein 4e-53 55
prgK NP_457265.1 pathogenicity 1 island effector protein Virulence SPI-1 Protein 1e-53 55
prgK NP_806474.1 pathogenicity island 1 effector protein Virulence SPI-1 Protein 1e-53 55
prgK AAS66872.1 PrgK Virulence SSR-2 Protein 3e-50 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O3K_05215 YP_006777759.1 type III secretion system lipoprotein EprK VFG0533 Protein 2e-53 55
O3K_05215 YP_006777759.1 type III secretion system lipoprotein EprK VFG0998 Protein 8e-43 45
O3K_05215 YP_006777759.1 type III secretion system lipoprotein EprK VFG1787 Protein 6e-36 42