Gene Information

Name : NSED_00395 (NSED_00395)
Accession : YP_006774833.1
Strain : Candidatus Nitrosopumilus sp. AR2
Genome accession: NC_018656
Putative virulence/resistance : Unknown
Product : cytochrome c oxidase subunit I
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 71225 - 72751 bp
Length : 1527 bp
Strand : +
Note : COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1

DNA sequence :
ATGGTTCTAGAATTACAAAAGCCACGTCCAATTTGGCAAATAATGTTTTCAACACATCACACTGATGTTGGTTTACTTTA
TCTAATTACATCGCTAGGATTCTTGTTCTTAGGTGGAGCCTTGGCTCTTGCAATCAGAGCAGAACTGTTCTTACCGGGAG
CACAAATCATTGGCGATGCCATGACGTTTAACAGAATTTTTACAGTTCACGGTACAACATTAATTTTCTTGTTTATCATT
CCATTTGCATCTTCAGTTGGTAACTACTATGTTCCAATTATGGTCAGATACAAAGACATGGCATATCCAAAACTAAACGC
AATTGCATTTTGGATGATTCCTCCTGGTGGAGCACTCATCTGGCTAGGCTTTGCTGACTTTACTTGGTATGCAACCCCGC
CATATTCTATCATTAGTGCTCCAGGACCAGCAGCTGACATGTGGATTTTTGGATTAAAGATTCTAGGTATTTCATCAGTG
TTAGGTGCAATCAACTTTATCGTTACCATTCTAAAGTGTAAACATCCGGATATGTCAATTGGACAAGTTCCGCTGTTAGC
ATGGTCTTTCTTATCATCATCATTGATTATACTCGTTGCAATTCCAACATTTGCAGCAGCACTATTGATGTTGCTCACTG
ATAGACTCGGTGTAAGTGGATTCTTCAATCCTGCAATGGGAGGAGATCCAATAGCATATGCACACTTGTTCTGGTTTACA
TTCCATCCTGAAGTGTATGTATTGGTAATTCCAGCAATTGGTATGATGTATGAAATCATTCCAAGATTCTCAAGAAAACC
AATCTACAGCTATAATTCTGGTGTCTTTGCATTTGTCTTGTTATCTATCGTCGGTTTCTCATCCTGGGCACATCACATGT
ATGCAACTGGAATGTCCTTTACTGAAAAAACCGTATTCATGGTAGGAACTCTTGCAGCAGTTCCGGCATCTGCCATGCAC
GTATTCAACTTTGTAGCAACCATGTGGAATGCAAGAATCAAATTCCTAACACCAATGATGTGGTCAGTAGGTGGAATTGC
ATTATTCTTCTCTGCAGGTGCAGGCGGTGTTGCAAATGCCGCTATGCCATTAGACTTTACAACACACGATACATACTGGG
TAGTAGGACACTTCCATCTCTTCGTGATGGGAACAATCGCATTTGGCTCCATTGGTTTCCTATACTACATGTTCCCATAT
GTGACTGGAAGAATGTACAATGAGACAATGGGTAAAATTCACTTTATCATGTCCTTTGTAGGTACTGTACTCGTATTCTT
TACACAACACGTACTTGGATTATATGGAATGCCAAGAAGAATTTTCGATTATCCGCCAATCCCAGAATGGATTGCTATGA
ACCAAATTGCAACAGTAGGAGCAATGATTATTGGTGTCAGTATGGCAATCTTCTTAGCAAATATGATTTACAGTTCCGGA
AAAGGAAAACCTGCAAATACCGAAGATCCATTTGGAGTCGGTGGGAAATACTATTATCCATTTGAGGCAAAGAACCCATC
ACACTAG

Protein sequence :
MVLELQKPRPIWQIMFSTHHTDVGLLYLITSLGFLFLGGALALAIRAELFLPGAQIIGDAMTFNRIFTVHGTTLIFLFII
PFASSVGNYYVPIMVRYKDMAYPKLNAIAFWMIPPGGALIWLGFADFTWYATPPYSIISAPGPAADMWIFGLKILGISSV
LGAINFIVTILKCKHPDMSIGQVPLLAWSFLSSSLIILVAIPTFAAALLMLLTDRLGVSGFFNPAMGGDPIAYAHLFWFT
FHPEVYVLVIPAIGMMYEIIPRFSRKPIYSYNSGVFAFVLLSIVGFSSWAHHMYATGMSFTEKTVFMVGTLAAVPASAMH
VFNFVATMWNARIKFLTPMMWSVGGIALFFSAGAGGVANAAMPLDFTTHDTYWVVGHFHLFVMGTIAFGSIGFLYYMFPY
VTGRMYNETMGKIHFIMSFVGTVLVFFTQHVLGLYGMPRRIFDYPPIPEWIAMNQIATVGAMIIGVSMAIFLANMIYSSG
KGKPANTEDPFGVGGKYYYPFEAKNPSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1478 YP_001800872.1 cytochrome c oxidase subunit I Not tested Not named Protein 9e-62 41