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Name : NSED_08310 (NSED_08310) Accession : YP_006776396.1 Strain : Candidatus Nitrosopumilus sp. AR2 Genome accession: NC_018656 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 1389147 - 1390412 bp Length : 1266 bp Strand : + Note : COG0172 Seryl-tRNA synthetase DNA sequence : ATGTTAGATCCAAAATTAATCAAAGAAAAACCTCAGATTATTCGGGATATGTTAAAAGCTAGATCTGTGGATTTTAATTT GGACGGATTAATAGAATCAGATCAAAAAAGACGTGAATTTATTATTAAAACTGATGAGTTGCGAAAAAAGAAAAATCAGG TGGCTTTAGAAATTTCTCAAAAAAAGAAGGCAGGCGAAGATGCATCATTGATTTTGTCAGAAATGAAAAACGTTTCAGCT GAGCTTGCAAAGTTAGAATCAGAACAAGAAAATATTGAAAATACCTATTCCAGATTAGCATTAACCATTCCAAATCTTGT TCACGATTCAGTTCCTATCGGAACAGATGAGAGTGCAAATCAAGAAGTTAGAAAATGGGGGAATGTTCCAAATTTTGATT TCAAAATTAATGATCATATTGATATTTCAGAAAATTTGGATTTAGTTGACCTTGAAAGGGCTGCCAAAGTAGCAGGGGCC AGATTCTATTATTTGAAAAATGATCTTGTAAGATTAAATCAATCATTAATTCACTATGGGTTAGATTTTCTAGCAAAAAA AGAATATTCTCTTGTTCAGCCGCCCTATATGATTAACAGAGAATCTATGGAAGGTGCAGTTATTGCAGATGACTTTGAAG AAGTAATCTACAAAGTTGAAGATGAGGATCTTTACATGATTGGAACATCTGAGCACGCCATGGCAGCAATGAGATCAAAA GAAATCCTAGAAGGAAAAGATTTGCCTTTAAGATATGCAGGTGTTAGTCCATGTTTTAGAAAAGAAGCCGGCGCACATGG AAGGGATCAGAAAGGAATTTTCAGAGTACATCAATTTGATAAGATTGAACAATTCGTATTTTCAAGACCTGAAGACTCTT GGAAAGAACACGAAAGAATGTTATCAGTTGCTGAAGAATTTTATCAAAACTTGGAAATTCCACATCGGGTGATGCTATTA TCAACTGGTGATATGGGAAAAGTTTCAGCAAAAACGTATGATATTGAGGCTTGGATGGCAGGACAAAATGCCTATAGAGA AATTGTCTCATGTTCAAACTGTTTAGACTATCAAGCAAGAAGATTGAAGATTAGGTTTAGGGATAAAACAAATGAAGACA CACAGTATGTGCATACACTAAACAGCACTCTGATAGCAACGACTAGAATTTTGGTATCAATTATGGAAAATTTCCAAACT AAAGATGGACACATAAGAATTCCTAGCGTTTTACAGAATTACATGGGAAATCAGAAAGAGATCTAG Protein sequence : MLDPKLIKEKPQIIRDMLKARSVDFNLDGLIESDQKRREFIIKTDELRKKKNQVALEISQKKKAGEDASLILSEMKNVSA ELAKLESEQENIENTYSRLALTIPNLVHDSVPIGTDESANQEVRKWGNVPNFDFKINDHIDISENLDLVDLERAAKVAGA RFYYLKNDLVRLNQSLIHYGLDFLAKKEYSLVQPPYMINRESMEGAVIADDFEEVIYKVEDEDLYMIGTSEHAMAAMRSK EILEGKDLPLRYAGVSPCFRKEAGAHGRDQKGIFRVHQFDKIEQFVFSRPEDSWKEHERMLSVAEEFYQNLEIPHRVMLL STGDMGKVSAKTYDIEAWMAGQNAYREIVSCSNCLDYQARRLKIRFRDKTNEDTQYVHTLNSTLIATTRILVSIMENFQT KDGHIRIPSVLQNYMGNQKEI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-82 | 42 |
