Gene Information

Name : ureC (NSED_07645)
Accession : YP_006776263.1
Strain : Candidatus Nitrosopumilus sp. AR2
Genome accession: NC_018656
Putative virulence/resistance : Virulence
Product : urease subunit alpha
Function : -
COG functional category : -
COG ID : -
EC number : 3.5.1.5
Position : 1285671 - 1287383 bp
Length : 1713 bp
Strand : -
Note : COG0804 Urea amidohydrolase (urease) alpha subunit

DNA sequence :
ATGACTCTAAATATTCCAAGAAAAAACTACGTTGATTTGTTTGGTCCTACTGTAGGTGATAGAGTTCGTCTTGCTGATAC
TGATTTAATTATAGAAATTGAAAAAGACTTGATCACATATGGTGATGAGGCTGTATTTGGTGGAGGAAAAAGTGTACGTG
ACGGATTAGGACAAGCAAGTGGAGTATCCAGAACAGAATCCGTTGATCTTGTTATTACCAATGCAATTGTGATGGATCCT
CTTTTAGGAATAATCAAAGCAGACATTGGAATTAAAGATGGGAAAATTGTTGGTGTAGGAAACGCCGGAAACCCTAACAT
CATGGATGATGTTGATATGATAATTTCATCAAACACTGAGATAATTGCAGGTGAGCATACAATTTGCACTCCTGGAACAA
TCGATTCACACATTCATTTTATTTCTCCTCAACAAGCAATACATGCAATCTGTAATGGTACCACTACAATGATTGGCGGA
GGAACTGGTCCTGCTGATGGAACAAATGCGACAACATGTACTCCCGGTAAATGGAATATTCATAGAATGATTGAATCCGT
TGATGAGTTACCATTAAACTTTGGATTTCTTGCAAAAGGAAATGATTCACTTGAAACTGCATTACTTGAACAGATAGAGG
CAGGAGCTTGTGGATTAAAATTACATGAAGACTGGGGTTCAACCCCCGCTGCAATTGATTCAGCTTTGAGTGTTGCAGAT
AAAACTGACACTCAAGTTGCAATTCATACAGATACGCTAAATGAATGTGGATTTGTTGATGATACCATTGAAGCAATTGC
TGGAAGAACAATCCATACTTATCACACTGAAGGAGCTGGAGGAGGTCATGCTCCAGATATTATGAAAGTTGCTGGTGAGG
AAAACATACTTCCGTCATCTACAAATCCTACAAGACCTTTTACAGTAAACACACTAGCTGAGCATCTTGATATGATGATG
GTCTGCCATCATCTTAACCCTTCAGTACCTGAAGATGTATCCTTTGCAGAGTCTAGAATTCGAGGTGAGACAATTGCAGC
AGAGGATGTACTTCATGATATTGGGGTATTGAGTATGATATCTTCAGACAGTCAAGCTATGGGAAGAGTTGGAGAAGTTA
CAACTAGAAACTGGCAGACTGCTGATAAAATGAAAAAGATGACTGGAAAGCTCCCCGAAGACAATGTCCGAAATGATAAT
TTTCGAGTGAAGCGATACCTTGCCAAAATCACGATAAATCCTGCCATAACTCATGGAATTTCTGATTATGTTGGATCTAT
GCAGCCAGGAAGATTGGCTGATATTGTTATTTGGTCTCCTCAGTTCTTTGGAGTCAAACCAAAAATGATCATCAAAGGTG
GCTTTATTGCGTATTCAATAATGGGTGATCCAAATGCCTCCATCCCTACAACTGAGCCAGTATTGTATCGTCCTATGTTT
GGGGCACTTGGTAAAACAATACAATCTACTTCTGTAACCTTCACATCACAACTAGCATTGGACAAAGGTATTGAATCTGA
AATTAATTCAGAAAAGAAACTGGTTCCTGTGAAAAACTGTCGTTCTATTGGAAAGAAAGACATGTTGTATAATGATCTCA
CTCCTGAGATTGAAGTGAACCCTGAAACATATGAAGTGAAAGTTGATGGAAAACTTGCAACGGTAGATCCTGCAGACAAA
GTTTCTATGTCACGACTTTACAACTTGTTTTAA

Protein sequence :
MTLNIPRKNYVDLFGPTVGDRVRLADTDLIIEIEKDLITYGDEAVFGGGKSVRDGLGQASGVSRTESVDLVITNAIVMDP
LLGIIKADIGIKDGKIVGVGNAGNPNIMDDVDMIISSNTEIIAGEHTICTPGTIDSHIHFISPQQAIHAICNGTTTMIGG
GTGPADGTNATTCTPGKWNIHRMIESVDELPLNFGFLAKGNDSLETALLEQIEAGACGLKLHEDWGSTPAAIDSALSVAD
KTDTQVAIHTDTLNECGFVDDTIEAIAGRTIHTYHTEGAGGGHAPDIMKVAGEENILPSSTNPTRPFTVNTLAEHLDMMM
VCHHLNPSVPEDVSFAESRIRGETIAAEDVLHDIGVLSMISSDSQAMGRVGEVTTRNWQTADKMKKMTGKLPEDNVRNDN
FRVKRYLAKITINPAITHGISDYVGSMQPGRLADIVIWSPQFFGVKPKMIIKGGFIAYSIMGDPNASIPTTEPVLYRPMF
GALGKTIQSTSVTFTSQLALDKGIESEINSEKKLVPVKNCRSIGKKDMLYNDLTPEIEVNPETYEVKVDGKLATVDPADK
VSMSRLYNLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ureC NP_286680.1 urease subunit alpha Virulence TAI Protein 9e-150 60
ureC NP_287088.1 urease subunit alpha Not tested TAI Protein 9e-150 60
ureC YP_005682174.1 Urease alpha subunit Not tested PiCp 7 Protein 4e-148 60
ureC YP_003784325.1 urease subunit alpha Not tested PiCp 7 Protein 4e-148 60
ureC YP_005686358.1 Urease alpha subunit Not tested PiCp 7 Protein 4e-148 60
ureC YP_005684266.1 Urease alpha subunit Not tested PiCp 7 Protein 4e-147 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ureC YP_006776263.1 urease subunit alpha VFG0270 Protein 1e-159 64