Gene Information

Name : NKOR_09100 (NKOR_09100)
Accession : YP_006774613.1
Strain : Candidatus Nitrosoarchaeum koreensis AR1
Genome accession: NC_018655
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1519441 - 1520118 bp
Length : 678 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
TTGACTAAAGTCTATGGTGAAGGCGAGAATAGAGTCAAAGCTCTTGATAATGCAACTCTTTCAGTAGAACAAGGTGAAAT
TGTTTTAATTGTTGGAAGTTCTGGTTCAGGAAAATCTACCTTACTTAACATGATTGGTTTGCTTGACCGTCCCACAAGTG
GCAAGATCTTCATTGATGGAACTGATACTACTACTCTTGATGACGACAAAATATCTTCATTTAGAAATAAAAAACTAGGA
TTCATCTTCCAGTTTTCAAATTTGCTTACTGACCTAACAGTTTTGGAAAATGTGTTGCTGCCAAGACAAATTGCAGGAAC
AAATAACACTGCTGAAAAAGATGCAAAAGATTTGCTAAAAGCAGTTGGATTAGAAGATCAAATGTATAAACGTGCAAACA
ATATTTCAGGAGGACAAGCTCAAAGAGCAGCAATTGCAAGAGGATTAATCAATAAACCCTCAATTGTTTTGGCAGATGAA
CCAACAGGAAATCTTGATTCTGTCACATCTGAAACTATCGTTCAACTGATGAAGTCTATGGCAAAAAAACTCAACCAAAC
ATTTGTTATTGTTACACACGATCGTCAACACTTTGGTGATGTGGATAAAGTAATTACGATAAAAGATGGCAAGGCCTTTG
AGGGAGATATGCCATCTGAAATGGAGGTTTTAGCATAA

Protein sequence : 
MTKVYGEGENRVKALDNATLSVEQGEIVLIVGSSGSGKSTLLNMIGLLDRPTSGKIFIDGTDTTTLDDDKISSFRNKKLG
FIFQFSNLLTDLTVLENVLLPRQIAGTNNTAEKDAKDLLKAVGLEDQMYKRANNISGGQAQRAAIARGLINKPSIVLADE
PTGNLDSVTSETIVQLMKSMAKKLNQTFVIVTHDRQHFGDVDKVITIKDGKAFEGDMPSEMEVLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-22 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-23 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-23 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-23 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NKOR_09100 YP_006774613.1 ABC transporter CP001581.1.gene598.p Protein 2e-31 46
NKOR_09100 YP_006774613.1 ABC transporter CP001581.1.gene798.p Protein 3e-32 46
NKOR_09100 YP_006774613.1 ABC transporter NC_008702.1.4606598. Protein 1e-18 44
NKOR_09100 YP_006774613.1 ABC transporter NC_012469.1.7686878. Protein 1e-25 42