Gene Information

Name : NKOR_08010 (NKOR_08010)
Accession : YP_006774405.1
Strain : Candidatus Nitrosoarchaeum koreensis AR1
Genome accession: NC_018655
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1328787 - 1329755 bp
Length : 969 bp
Strand : -
Note : COG0214 Pyridoxine biosynthesis enzyme

DNA sequence :
ATGCTTCCACTATCTGGAGAACGCAAAGACGCAAAGGGTATAATTTCTGATAAATCAGACTCTGCTGATATTATTCGTGG
TTCATCAACTCTAAAACGTGGATTTGCCCACATGCTAAAGAACGGAGTTGTAATGGATGTCACAACTGTTGAGCAAGCTC
AGATTGCAGAAGAAGCAGGCGCAGTATCTGTGATGGTTCTAGACAAACTTCCTTCTGATGTTAGAAAAGCAGGAGGCGTT
GCAAGAACTGCAAGTATTAGAATTATTGAAGATATTATGGATTCAGTTACAATTCCTGTAATGGCAAAATGCAGAATTGG
TCATGTCAATGAAGCACTTGTTTTGCAAGAAACTGATGTTGATATGATTGATGAATCAGAAGTGTTAACTCCAGCTGATG
AACTTCGTCACATTTGGAAATGGGATCTCACAACTCCTGTTGTAAACGGTGCACGATCTTTGGCAGAAGCTTTGAGAAGA
ATTGAAGAAGGTGCAGCTATGATTAGAACAAAAGGAGAACCTGGAACAGGAAATGTTGCAGAAGCTATTACTCATATTAA
AAAAGTAAATGATGAATTAAGAACAATAAAATCAATTTATGATTCTGGAGACAACCAAGACTTGGTTAGAATGGCAAGAG
AGTTCAAAGTGTCTTATGATATTATTGAGCAAACAGCAAAACTTGGCAGATTACCTGTTGTGAACTTTGCTGCCGGTGGA
ATTGCAACACCAGCTGATGCAGCATACCTAATGTCATTGGGATGTGATGGAATCTTTGTTGGTTCTGGAATTTTTAATGC
CAATGATGCAAAAGAGCGTGCAAGAGCAATTGTCTTGGCAACTACTTTCTGGAATGAGACTGACAAAGTCAAAGAAGCAC
AAAAAATGATTGATGAAAGACAATCAATGCTTGGATTAGATGTTAAAACACTAGAATTACGTATGCAAGATAGAGGCGGT
TCTGCATGA

Protein sequence :
MLPLSGERKDAKGIISDKSDSADIIRGSSTLKRGFAHMLKNGVVMDVTTVEQAQIAEEAGAVSVMVLDKLPSDVRKAGGV
ARTASIRIIEDIMDSVTIPVMAKCRIGHVNEALVLQETDVDMIDESEVLTPADELRHIWKWDLTTPVVNGARSLAEALRR
IEEGAAMIRTKGEPGTGNVAEAITHIKKVNDELRTIKSIYDSGDNQDLVRMAREFKVSYDIIEQTAKLGRLPVVNFAAGG
IATPADAAYLMSLGCDGIFVGSGIFNANDAKERARAIVLATTFWNETDKVKEAQKMIDERQSMLGLDVKTLELRMQDRGG
SA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 5e-57 49
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 4e-57 49
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 4e-57 49