Gene Information

Name : O3M_26227 (O3M_26227)
Accession : YP_006772803.1
Strain :
Genome accession: NC_018654
Putative virulence/resistance : Unknown
Product : protein encoded within IS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 12453 - 13742 bp
Length : 1290 bp
Strand : +
Note : COG3436 Transposase and inactivated derivatives

DNA sequence :
GTGTATGACCCGGCAGTACAGCGTCCGTTGCGTCAGACCCGCCCCCGTAAGCCGTTCCCTGAATCACTACCCCGTGACGA
AAAGCGACTGTTGCCTGCGGCGCCGTGCTGCCCGAACTGCGGCGGTTCACTGAGCTATCTGGGCGAGGATACCGCCGAAC
AGCTGGAGTTGATGCGTAGCGCCTTCCGGGTTATCCGGACGGTACGGGAAAAACATGCCTGTACTCAGTGCGATGCCATC
GTGCAGGCACCTGCACCTTCGCGGCCCATCGAGCGGGGTATCGCCGGACCGGGGCTGCTGGCCCGCGTGCTGACCTCGAA
GTATGCAGAGCACACCCCGCTGTATCGCCAGTCAGAAATATACGGCCGGCAAGGTGTGGAGCTGAGCCGTTCACTGCTGT
CGGGCTGGGTGGATGCATGCTGCCGGCTGCTGTCTCCGCTGGAAGAGGCGCTTCATGGCTATGTGCTGACTGACGGTAAG
CTCCATGTTGATGACACGCCTGTCCCGGTGCTGTTGCCAGGCAATAAGAAAACGAAGACCGGGCGGTTGTGGGCGTATGT
TCGTGACGACTGTAACGCCGGGTCAACGCTGGCGCCGGCGGTGTGGTTCGCTTACAGCCCGGACAGAAAAGGCATCCATC
CGCAGACCCATCTTGCGGGGTTCAGTGGTGTACTGCAGGCGGATGCATACGCCGGGTTCAACGAGCTGTACCGGGATGGC
CGGATAACGGAAGCCGCCTGTTGGGCTCACGCCCGCCGTAAAATCCACGATGTGCACGTTCGCACCCCGTCAGCCCTGAC
GGAGGAAGCGCTGAAACGGATCGGCGAACTGTACGCCATCGAGGCAGAGATAAGGGGAATGACGGCGGAACAGCGCCTTG
CCGAACGTCAGTTGAAAACGAAACCGCTGCTGAAATCCCTGGAAAGCTGGCTGCGTGAAAAGATGAAAACCCTGTCGCGA
CACTCAGAACTGGCGAAAGCGTTCGCATACGCCCTGAAGCAGTGGCCGGCGCTGACGTACTATGCAGATGATGGCTGGGC
TGAGGCGGACAATAACATCGCTGAAAATGCGTTGCGGATGGTCAGTCTGGGCCGCAAAAACTACCTGTTCTTCGGTTCGG
ATCATGGAGGAGAGCGGGGAGCGCTGCTGTACAGCCTGATCGGGACGTGCAAACTGAACGGAGTGGAGCCAGAAAGCTAT
CTCCGCTATGTCCTTGACGTCATAGCCGACTGGCCGATAAACCGGGTCGGCGAACTGCTCCCCTGGCGCGTAGCACTGCC
GACTGAATAA

Protein sequence :
MYDPAVQRPLRQTRPRKPFPESLPRDEKRLLPAAPCCPNCGGSLSYLGEDTAEQLELMRSAFRVIRTVREKHACTQCDAI
VQAPAPSRPIERGIAGPGLLARVLTSKYAEHTPLYRQSEIYGRQGVELSRSLLSGWVDACCRLLSPLEEALHGYVLTDGK
LHVDDTPVPVLLPGNKKTKTGRLWAYVRDDCNAGSTLAPAVWFAYSPDRKGIHPQTHLAGFSGVLQADAYAGFNELYRDG
RITEAACWAHARRKIHDVHVRTPSALTEEALKRIGELYAIEAEIRGMTAEQRLAERQLKTKPLLKSLESWLREKMKTLSR
HSELAKAFAYALKQWPALTYYADDGWAEADNNIAENALRMVSLGRKNYLFFGSDHGGERGALLYSLIGTCKLNGVEPESY
LRYVLDVIADWPINRVGELLPWRVALPTE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-170 99
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 0.0 93
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 0.0 93
unnamed AAC31494.1 L0015 Not tested LEE Protein 0.0 93
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 0.0 93
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 0.0 93
tnp AEA34686.1 transposase Not tested Not named Protein 0.0 93
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 0.0 93
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 0.0 93
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 0.0 93
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 0.0 93
unnamed AAL57570.1 unknown Not tested LEE Protein 0.0 93
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 0.0 93
SF2972 NP_708746.1 hypothetical protein Not tested SHI-1 Protein 3e-99 72
unnamed AAK00463.1 unknown Not tested SHI-1 Protein 7e-102 72
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 8e-144 66
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 1e-133 66
s0025 CAD33772.1 IS66-like transposase Not tested PAI I 536 Protein 7e-106 65
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 8e-142 65
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 8e-142 65
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 1e-108 61
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 1e-108 61
tnp AEA34687.1 IS66 family transposase Not tested Not named Protein 5e-89 60
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 4e-120 59
RS12 AAP82957.1 transposase Not tested PAPI-2 Protein 7e-53 44
EXB16 ABD94703.1 ISPpu14 transposase Orf3 Not tested ExoU island B Protein 2e-63 43
RL059 AAP84184.1 transposase Not tested PAPI-1 Protein 2e-71 42
tnpC AEZ06051.1 transposase Not tested Tn6167 Protein 8e-68 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O3M_26227 YP_006772803.1 protein encoded within IS VFG1700 Protein 5e-171 99
O3M_26227 YP_006772803.1 protein encoded within IS VFG0793 Protein 0.0 93
O3M_26227 YP_006772803.1 protein encoded within IS VFG0634 Protein 1e-99 72
O3M_26227 YP_006772803.1 protein encoded within IS VFG1513 Protein 4e-106 65
O3M_26227 YP_006772803.1 protein encoded within IS VFG1736 Protein 3e-112 65