Gene Information

Name : O3M_04645 (O3M_04645)
Accession : YP_006768603.1
Strain : Escherichia coli 2009EL-2050
Genome accession: NC_018650
Putative virulence/resistance : Unknown
Product : IS1 transposase InsAB'
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 945233 - 945694 bp
Length : 462 bp
Strand : -
Note : COG1662 Transposase and inactivated derivatives, IS1 family

DNA sequence :
ATGCCGGGCTACTGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTACGTCACTTAAAAAACTCAGGCCGCAGTCGGT
AACCTCGCGCATACAGCCAGGCAGTGACGTCATCGTCTGCGCGGAAATGGACGAACAGTGGGGCTATGTCGGGGCTAAAT
CGCGCCAGCGCTGGCTGTTTTACGCGTATGACAGGCTCCGGAAGACGGTTGTTGCGCACGTATTCGGTGAACGCACTATG
GCGACGCTGGGGCGTCTTATGAGCCTGCTGTCACCCTTTGACGTGGTGATATGGATGACGGATGACTGGCCGCTGTATGA
ATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGC
AGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTTCAAAATCGGTGGAGCTGCATGA

Protein sequence :
MPGYCPHYGRWPQHDFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTM
ATLGRLMSLLSPFDVVIWMTDDWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFFKIGGAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
insB NP_458736.1 insertion element IS1 protein InsB Not tested SPI-7 Protein 4e-64 96
EC042_4085 YP_006098368.1 transposase Not tested Tn2411 Protein 4e-64 96
EC042_4113 YP_006098397.1 transposase Not tested Tn2411 Protein 4e-64 96
InsB (Tn1) CAJ77072.1 Transposase Not tested AbaR1 Protein 2e-64 96
insB ADD91744.1 transposase Not tested PAI-I AL862 Protein 1e-62 92
Z1192 NP_286727.1 IS1 protein InsB Not tested TAI Protein 5e-62 92
Z1632 NP_287135.1 IS1 protein InsB Not tested TAI Protein 5e-62 92
tnpH AAD44742.1 TnpH Not tested SHI-2 Protein 2e-61 91
S4059 NP_839227.1 IS1 orfB Not tested SHI-2 Protein 2e-61 91
insB NP_709451.1 IS1 ORF2 Not tested SHI-2 Protein 1e-59 89
insB NP_709463.1 IS1 ORF2 Not tested SHI-2 Protein 3e-45 89
aec38 AAW51721.1 InsB Not tested AGI-3 Protein 1e-57 84

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O3M_04645 YP_006768603.1 IS1 transposase InsAB' VFG0612 Protein 4e-60 89