Gene Information

Name : O3M_04480 (O3M_04480)
Accession : YP_006768571.1
Strain : Escherichia coli 2009EL-2050
Genome accession: NC_018650
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 908119 - 910668 bp
Length : 2550 bp
Strand : +
Note : COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
GTGAGTATCTATCTGAAACCAATTATTAATAAATTAGCTCCAGAAAGTCGAAATACTCTGGATTCTGCAATTAATTACGC
AATATCAAGGTCACATCATGAAGTAGACTGTCTACATCTTCTATGGAAGTTATTGCAGGAACATAAATATATAGCCGAAG
TGCTTTATGAGCAGTCCTTATTTAATCCTGAGAGGGTTCTTAATGCTATTGAAAGTGAACTTATCCGTATCAATACAGTA
CCACAATCCTCACCTGTATTTTCTGAGTCGATGCAGACTCTACTGGAGAAAACATGGATACATGCCAGTACTAAATGGCA
AATCGATCATATAGATATCCCTGTCTTTTTGAGTACTATGATTAATTTAAGAGATTCAATATTTCCTCTCAATGTTTCTG
ATGCGTTATGTTGTGATATGGATGTAGCTGAGGAGTTACTTATCTCTTTTTCAGACGAAGCAGAGCATTCTGCTTCTCAT
CGTCCCACCGATAGGTCTTCACATGAATATCTCAGTAAATATACTGAGAATCTCTCTCTGCGGGCAGAAACAGGTAAATT
AGATCCGGTTACTGGCAGAGAGAAGGAAGTCAGACAACTTATCGATATTTTGCTTCGTCGCAGACAGAATAATCCAATAC
TGACCGGTGAACCGGGAGTAGGGAAAAGTAGTATAGTAGAAGGTTTAGCACTGCAAATTGCGTCTGGCCGTGTGCCTGAT
GTACTGAAGAATGTCCGGATCCATGCCCTTGATATGGGGGCTCTGCTTGCGGGAGCCAGTGTCAGAGGGGAATTCGAAAA
TCGCCTAAAATCACTGTTGACCGAACTTAATTCTTTGGATGGCACAGCTATTTTGTTTATTGATGAGGCTCATTCCCTTA
TCGGTGCAGGAGGACTTCCGGGACAGACTGATGCAGCTAATTTGCTTAAGCCTGCTCTTGCCCGTGGAGAATTGCGCATT
ATAGCCGCAACGACATGGGGAGAATATAAAAAGTATTTTGAAAAGGATGGGGCGTTAGCCCGGCGTTTTCAGATAGTAAA
AGTAGCAGAGCCAAATCAGGATGTCACAGCGGAAATGCTACGTTCTCTTTTGCCCATGATGGAAAAACACCATAATGTTT
CTATCAGGGAAGAAGCAATAACTGCAACGGTACATCTATCAGACCGTTATCTGCATGGGCGCCGTCAACCAGATAAATCT
GTAAGTCTGTTAGATACAGCTTGTTCTCGGGTTGCTGTATCTCAGTCTACATCACCAGATGCCATTCAGGATGTCGAAGC
TTCATTGGTAAGATACCAAGGGGAACTTGCGCTGCTGACACAGGAAAGGTCAGATGTTTTGCGTCAGGAAATGCTTGCAA
ATAAAATTGCTCAACTTGAGGAGGAGCTTGAGCAACTCAAATCAGCGTGGCGTCATCAAAGTGAACTGGTTGCAAGAATA
CAAAGTTCAGATGATATTTCATCAAAGAATATGTACAGAAAAGAACTGGAAAGTGCATATAAGAAAGACAGTCCTATGGT
TTTTGAGTGTGTGGATAAAAATTGTGTTGCTGATGTTGTTTCTGGGTGGACAGGTGTTCCACTGGGTGTATGCCTTGATG
GTGAACAACAAAAAGCATCCGGTCTGTTAAGATGCTTGGAGCAGCGAGTTTTGGGGCAGCGATATGCTATGTCCGCTATT
GCATCACAAGTTCTTATTTGTCGGGCAGATCTTAAAGATCCTGTAAAACCTGATGGGGTATTTTTACTTGCGGGCCCTTC
TGGCACAGGCAAAACGGAGACAGCCAGGGCGCTGGCCGAGTTTGTTTATGGGGATGAGAATAAACTCATCACGATTAATA
TGACTGAATTTCAGGAAGCTCACACTGTTTCCACTCTGAAGGGGGCACCTCCTGGATATGTTGGTTTTGGTCAGGGAGGG
ACTCTTACTGAAAGGGTGAGTCATAATCCATACAGTGTTATTCTGCTTGATGAAATTGAAAAAGCACATCCGGATGTCCT
GGAGTTCTTCTTCCAGATATTTGACTCAGGTATTATCGAGGATGCTGAAGGTAAGATGGTGTCTTTCAGAGATTGTCTCA
TAATAATGACATCAAACTTTGCCAGTGAAAATATCACAAACATATGGAATGATGGTGAGACAAATAGAGACAGAATAAAA
GAAATGCTTCTTCCTTTGTTTAATGAGCATTTTGGGGCGGCATTTATGGGGAGAACTAACTTAATTCCGTTCACACCGTT
GCATTCCAAAACACTGAGAGATATCGTACTCATTAAAATTGATAAGATCTGCCAACGTTTTGAACAGGCATCAGGTCAGA
TGTATAAGATAGAATACAATGATTCTCTTATTGACTGGATTACACATCATTGTCAATGTGATAAGTCTGGAGCTAGGGAT
ATAGACTCAGTACTTAACAGCACGGTTCTTCCTGTCTTGGCCAGATATTTGACTGACTCTGAAGATAATAGAACCCCCAA
GAAAATAAGAATATCAGTAAGGAAAAATAACATTACATTACGTAGTTCGCAATTTGCAACTCGTAATTGA

Protein sequence :
MSIYLKPIINKLAPESRNTLDSAINYAISRSHHEVDCLHLLWKLLQEHKYIAEVLYEQSLFNPERVLNAIESELIRINTV
PQSSPVFSESMQTLLEKTWIHASTKWQIDHIDIPVFLSTMINLRDSIFPLNVSDALCCDMDVAEELLISFSDEAEHSASH
RPTDRSSHEYLSKYTENLSLRAETGKLDPVTGREKEVRQLIDILLRRRQNNPILTGEPGVGKSSIVEGLALQIASGRVPD
VLKNVRIHALDMGALLAGASVRGEFENRLKSLLTELNSLDGTAILFIDEAHSLIGAGGLPGQTDAANLLKPALARGELRI
IAATTWGEYKKYFEKDGALARRFQIVKVAEPNQDVTAEMLRSLLPMMEKHHNVSIREEAITATVHLSDRYLHGRRQPDKS
VSLLDTACSRVAVSQSTSPDAIQDVEASLVRYQGELALLTQERSDVLRQEMLANKIAQLEEELEQLKSAWRHQSELVARI
QSSDDISSKNMYRKELESAYKKDSPMVFECVDKNCVADVVSGWTGVPLGVCLDGEQQKASGLLRCLEQRVLGQRYAMSAI
ASQVLICRADLKDPVKPDGVFLLAGPSGTGKTETARALAEFVYGDENKLITINMTEFQEAHTVSTLKGAPPGYVGFGQGG
TLTERVSHNPYSVILLDEIEKAHPDVLEFFFQIFDSGIIEDAEGKMVSFRDCLIIMTSNFASENITNIWNDGETNRDRIK
EMLLPLFNEHFGAAFMGRTNLIPFTPLHSKTLRDIVLIKIDKICQRFEQASGQMYKIEYNDSLIDWITHHCQCDKSGARD
IDSVLNSTVLPVLARYLTDSEDNRTPKKIRISVRKNNITLRSSQFATRN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-125 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O3M_04480 YP_006768571.1 hypothetical protein VFG2076 Protein 2e-132 45