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Name : O3M_04340 (O3M_04340) Accession : YP_006768547.1 Strain : Escherichia coli 2009EL-2050 Genome accession: NC_018650 Putative virulence/resistance : Unknown Product : UvrD/REP helicase Function : - COG functional category : - COG ID : - EC number : - Position : 885856 - 887520 bp Length : 1665 bp Strand : + Note : COG0210 Superfamily I DNA and RNA helicases DNA sequence : GTGGGACGGAAAAACCGGCATCCGGATTTTGTCATTATTGACCCGGAGAACGGACTGGTATTTCTGGAGGTCAAGGACTG GACGGTTTCCACGCTGCGCCAGGTAAATCAGGAGCAGGTCACGCTGGAAACCGACGGTCTTCTGAAATCAGAAATCAATC CGCTGGTACAGGTTCGTCGTTATGCCTGTGATACGGTTAATGCCTTACCTGCAAACCCGTGCTTACGGCAGAATGACGGT CAGTATAAGGGACGGCTGAACCTGGCCTGGGCGTATGGTGTGGTGTTTACCCGCATTACCCGTCAGCAACTGAAGACACT GGCAGGGAATGATGAGAATGCGGTGGAAAAAATTTTTCCTTCAGCACAGACAATCTGCCAGGATGAAATGACGCAGTCTG TTTTACCTGAAGTATTCCGGCAAAAAATTGCCGGGATGTTTACCACGGGATTCAGAACCCGGGTGACACCCCGGATGAGA GATATTCTGCGCGCCCATCTGTTTCCTGAAGTGACCGTGAAACAGAACTCACAAATCAAAATTATGGATATTCAGCAGGA GATTCTGGCCAGAAATATTGGTGACGGGCATCGTGTCATTCATGGTGTGGCCGGTTCCGGAAAAACCATGATTCTTTTGT TCCGTTGCCTTTACCTGGCTGAAACCACACCCGGAAAGATTCTGGTGTTGTGCTACAACATTACCCTGGCCAGCTATCTG CGGGAATGCATTGAAGCCAGAGGGCTGGCGTCACGGGTTACGGTATCCCATTTTCACAGCTGGTGTGCCTCAATGGTAAA ACGCCACGGTATTAAGGTGACGGCCGACAGAAAAGAATATCCTGATAAATGCTTCAGTGCACTGGAAGAGGCCGTGAACA GCGGAAAAATCACCCGAACCGGATATGATGCTGTACTGGTGGATGAGGGGCATGATTTTGACAGTCGCTGGCTGGCCCTG ATTGCCCGTCTGTTTGATAACGCATCCCGTTCACTGCTCCTGATGTACGATGACGCCCAGTCCATTTACCGGCGGGAGCG GGCCCTGAACTTTTCTCTGGCCAGTGTGGGGATTCAGGCACAGGGACGCACTTCTGTCCTGCCGGTCAATTATCGTAATC CGAAACGCATTCTGCACTTTGCTTATGCATTCTCCCGCGAGTATTTTGAAAAACATCAGAACCGTGAAATACCGCTCGTT CAGCCACAGGCGGGCGGTGAAGAGGGTACAGAGCCGGAAATCCTGCGTTGTGCTTCTGAACGTGATGAAGCCAGACAAGT TGCAGACTGGCTGGAGAAGCGCCATGTCCTGTGTGGTCACTGGAGTGATATGGCTGTGCTGTGTCCGACAGAGCGTTCAG CGCAACAATTGCAGGACGTTATGACACTACGCGGGGTACCTTTTGCCACCTGTTTTGACAGGGAAGGCAAGAAGACATAC TCGCGACGTAAGGATGTGGTGCATTTACTGACGTACCAGAGCAGCAAGGGGCTGGAGTTCCCGTATGTGGCGGTTATCAA TGCGTCTTTCGTGCACTCTGGTGCAGCGGATGAGTCTGAAGTGATTCCGGTGCTTTATGTGGCGTTCACCCGGGCAACCC GTGAATTACTGGTGACCTGTTACCGTGAAAACAGTATCAGTCGCCACCTTGAGGATTTTGCATAA Protein sequence : MGRKNRHPDFVIIDPENGLVFLEVKDWTVSTLRQVNQEQVTLETDGLLKSEINPLVQVRRYACDTVNALPANPCLRQNDG QYKGRLNLAWAYGVVFTRITRQQLKTLAGNDENAVEKIFPSAQTICQDEMTQSVLPEVFRQKIAGMFTTGFRTRVTPRMR DILRAHLFPEVTVKQNSQIKIMDIQQEILARNIGDGHRVIHGVAGSGKTMILLFRCLYLAETTPGKILVLCYNITLASYL RECIEARGLASRVTVSHFHSWCASMVKRHGIKVTADRKEYPDKCFSALEEAVNSGKITRTGYDAVLVDEGHDFDSRWLAL IARLFDNASRSLLLMYDDAQSIYRRERALNFSLASVGIQAQGRTSVLPVNYRNPKRILHFAYAFSREYFEKHQNREIPLV QPQAGGEEGTEPEILRCASERDEARQVADWLEKRHVLCGHWSDMAVLCPTERSAQQLQDVMTLRGVPFATCFDREGKKTY SRRKDVVHLLTYQSSKGLEFPYVAVINASFVHSGAADESEVIPVLYVAFTRATRELLVTCYRENSISRHLEDFA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| S12 | AAQ19135.1 | putative UvrD/REP helicase | Not tested | PAI I CL3 | Protein | 0.0 | 99 |
| uvrD | ADD91733.1 | putative uvrD/REP helicase | Not tested | PAI-I AL862 | Protein | 0.0 | 96 |
