Gene Information

Name : O3M_04280 (O3M_04280)
Accession : YP_006768535.1
Strain : Escherichia coli 2009EL-2050
Genome accession: NC_018650
Putative virulence/resistance : Virulence
Product : Prophage CP4-57 regulatory protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 877038 - 877244 bp
Length : 207 bp
Strand : -
Note : COG3311 Predicted transcriptional regulator

DNA sequence :
ATGAATACCCCAGTTTCGCTGATGGATGACCAGATGGTCGACATGGCGTTTATCACTCAACTGACCGGCTTAACCGATAA
GTGGTTTTACAAGCTCATCAAGGATGGTGCCTTTCCGGCCCCCATCAAACTCGGCCGCAGCTCCCGATGGCTGAAAAGTG
AAGTGGAAGCCTGGTTGCAGGCGCGTATTGCACAATCCCGTCCGTAA

Protein sequence :
MNTPVSLMDDQMVDMAFITQLTGLTDKWFYKLIKDGAFPAPIKLGRSSRWLKSEVEAWLQARIAQSRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAE85187.1 hypothetical protein Not tested PAI V 536 Protein 9e-27 99
rox AAR97599.1 regulator of excision Not tested SHI-1 Protein 2e-26 96
ECO103_3577 YP_003223438.1 transcriptional regulator Not tested LEE Protein 5e-26 96
S3190 NP_838473.1 hypothetical protein Not tested SHI-1 Protein 3e-26 96
SF2987 NP_708761.1 hypothetical protein Not tested SHI-1 Protein 3e-26 96
unnamed CAI43835.1 hypothetical protein Not tested LEE Protein 7e-26 96
unnamed ADD91712.1 putative transcriptional regulator AlpA Not tested PAI-I AL862 Protein 7e-26 96
unnamed AAL08466.1 unknown Not tested SRL Protein 4e-26 95
Z1188 NP_286723.1 hypothetical protein Not tested TAI Protein 1e-14 70
Z1627 NP_287131.1 hypothetical protein Not tested TAI Protein 1e-14 70
c5192 NP_757040.1 hypothetical protein Not tested PAI II CFT073 Protein 8e-18 70
unnamed CAD33739.1 hypothetical protein Not tested PAI I 536 Protein 6e-18 70

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O3M_04280 YP_006768535.1 Prophage CP4-57 regulatory protein VFG0651 Protein 8e-27 96
O3M_04280 YP_006768535.1 Prophage CP4-57 regulatory protein VFG1057 Protein 2e-26 95
O3M_04280 YP_006768535.1 Prophage CP4-57 regulatory protein VFG1480 Protein 2e-18 70