Gene Information

Name : O3M_04235 (O3M_04235)
Accession : YP_006768526.1
Strain : Escherichia coli 2009EL-2050
Genome accession: NC_018650
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 865033 - 865851 bp
Length : 819 bp
Strand : -
Note : -

DNA sequence :
ATGCGACTAGCCAGTCGTTTTGGTTATGCGAACCAGATACGCCGTGACCGTCCGCTGACACACGAAGAACTGATGCACTA
TGTGCCGGGGATTTTCGGGGAAGATAAACACACGTCCCGAAGCCAGAACTATACGTACATCCCCACCATCACCGTACTGG
AAAGCCTGCAGCGGGAAGGCTTTCAGCCATTCTTCGCCTGCCAGACCCGTGTGCGCGACCCGGGCCGCCGGGGATACACA
AAACACATGCTGCGTCTGCGGCGGGCCGGAGAGATAAACGAAGAACATTTCCCTGAAATTATTCTGCTCAACTCTCATGA
CGGTACCTCCAGCTACCAGATGCTGCCGGGTTACTTCAGGTTCGTCTGCCAGAACGGATGCGTCTGTGGTCAGTCTCTGG
GGGAAGTGCGTGTTCCGCACCGGGGAAATGTGGTGGACAGAGTCATTGAAGGGGCTTACGAGGTGGTGGGGGTTTTTGAC
CGGATTGAGGAAAAGCGTGATGCCATGCAGTCGCTGATTCTGCCGCCACCGGCACGCCAGGCGCTGGCACAGGCGGCACT
GACTTACCGTTATGGTGACGAACATCAGCCCGTCACCACCGCTGACATTCTGACACCGCGACGCAGGGAGGATTACGGTA
AGGACCTGTGGAGTACTTATCAGACCATCCAGGAGAATATGCTGAAAGGCGGGATTTCCGGTCGCAGTGCCAGAGGAAAA
CGTATCCACACCCGTGCCATTCACAGCATCGACACCGATATTAAGCTCAACCGCGCATTGTGGGTGATGGCGGAAACGCT
GCTGGAGAGCCTGCGCTGA

Protein sequence :
MRLASRFGYANQIRRDRPLTHEELMHYVPGIFGEDKHTSRSQNYTYIPTITVLESLQREGFQPFFACQTRVRDPGRRGYT
KHMLRLRRAGEINEEHFPEIILLNSHDGTSSYQMLPGYFRFVCQNGCVCGQSLGEVRVPHRGNVVDRVIEGAYEVVGVFD
RIEEKRDAMQSLILPPPARQALAQAALTYRYGDEHQPVTTADILTPRRREDYGKDLWSTYQTIQENMLKGGISGRSARGK
RIHTRAIHSIDTDIKLNRALWVMAETLLESLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 4e-119 99
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 4e-119 99
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 4e-119 99
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 2e-117 96
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 2e-117 96
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 4e-117 96
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 2e-114 93
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 4e-113 92
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-113 92
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-113 92
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 2e-110 90
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 2e-110 90
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 1e-107 89
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 1e-108 89
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 1e-109 89
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 3e-71 55
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 2e-70 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O3M_04235 YP_006768526.1 hypothetical protein VFG0658 Protein 1e-117 96
O3M_04235 YP_006768526.1 hypothetical protein VFG1676 Protein 1e-114 93
O3M_04235 YP_006768526.1 hypothetical protein VFG1526 Protein 6e-109 89
O3M_04235 YP_006768526.1 hypothetical protein VFG1615 Protein 8e-108 89