Gene Information

Name : O3M_04230 (O3M_04230)
Accession : YP_006768525.1
Strain : Escherichia coli 2009EL-2050
Genome accession: NC_018650
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 864258 - 864731 bp
Length : 474 bp
Strand : -
Note : -

DNA sequence :
ATGAAAACATTGTCTCAGAACACCACCTCTTCGGTCTCAGCACCGGAGACTGACCTGCAACAACTGGTTGCCAGCCTCGT
CCCTGATGAACAACGTATCAGTTTCTGGCCGCAGCACTTTGGCCTCATTCCACAGTGGGTGACCCTGGAGCCCCGTATCT
TCGGCTGGATGGACCGTCTTTGCGAAAACTACTGCGGTGGTATCTGGAATCTGTACACCCTGAACAACGGCGGGGCATTT
ATGGCACCCGAACCGGATGACGATGATGGCGAAAACTGGGTACTGTTCAATGCCATGAACGGTAACCGCGCTGAAATGAG
CCCGGAAGCCGCCGGCATTGCCGCCTGTCTGATGACGTACAGTCATCATGCCTGTCGTACGGAGTGTTATGCCATGACGG
TCCATTATTACCGGCTGCGGGATTACGCCCTGCAGCATCCGGAATGCAGCGCCATTATGCGCATCATCGATTGA

Protein sequence :
MKTLSQNTTSSVSAPETDLQQLVASLVPDEQRISFWPQHFGLIPQWVTLEPRIFGWMDRLCENYCGGIWNLYTLNNGGAF
MAPEPDDDDGENWVLFNAMNGNRAEMSPEAAGIAACLMTYSHHACRTECYAMTVHYYRLRDYALQHPECSAIMRIID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S3200 NP_838483.1 hypothetical protein Not tested SHI-1 Protein 3e-64 96
SF2995 NP_708769.2 hypothetical protein Not tested SHI-1 Protein 3e-64 96
unnamed CAI43899.1 hypothetical protein Not tested LEE Protein 3e-64 96
unnamed AAL67346.1 intergenic-region protein Not tested PAI II CFT073 Protein 7e-64 95
ORF_48 AAZ04457.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 4e-60 88
yfjX YP_854322.1 hypothetical protein Not tested PAI I APEC-O1 Protein 6e-60 88
c5155 NP_757003.1 hypothetical protein Not tested PAI II CFT073 Protein 6e-60 88
yfjX ADD91703.1 YfjX Not tested PAI-I AL862 Protein 2e-64 87
unnamed CAI43844.1 hypothetical protein Not tested LEE Protein 3e-65 87
aec72 AAW51755.1 Aec72 Not tested AGI-3 Protein 3e-63 87
ECO103_3588 YP_003223445.1 hypothetical protein Not tested LEE Protein 1e-57 87
Z1216 NP_286751.1 hypothetical protein Not tested TAI Protein 6e-59 86
Z1656 NP_287159.1 hypothetical protein Not tested TAI Protein 6e-59 86
unnamed CAD42097.1 hypothetical protein Not tested PAI II 536 Protein 2e-62 86
unnamed CAD66202.1 hypothetical protein Not tested PAI III 536 Protein 6e-63 86
yfjX CAE85200.1 YfjX protein Not tested PAI V 536 Protein 1e-58 85
z1216 CAD33786.1 Z1216 protein Not tested PAI I 536 Protein 1e-63 84

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O3M_04230 YP_006768525.1 hypothetical protein VFG0659 Protein 9e-65 96
O3M_04230 YP_006768525.1 hypothetical protein VFG1616 Protein 8e-63 86
O3M_04230 YP_006768525.1 hypothetical protein VFG1677 Protein 3e-63 86
O3M_04230 YP_006768525.1 hypothetical protein VFG1527 Protein 5e-64 84