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Name : O3M_04195 (O3M_04195) Accession : YP_006768518.1 Strain : Escherichia coli 2009EL-2050 Genome accession: NC_018650 Putative virulence/resistance : Virulence Product : general secretion pathway protein YghD Function : - COG functional category : - COG ID : - EC number : - Position : 860414 - 860950 bp Length : 537 bp Strand : + Note : COG3149 Type II secretory pathway, component PulM DNA sequence : ATGTTACGCGATAAATTTATTCACTATTTTCAGCAATGGCGTGAACGCCAGTTAAGCCGTGGCGAACACTGGCTGGCACA ACACCTGGCGGGGCGTTCTCCGCGTGAAAAGGGCATGTTACTGGCAGCGGTGGTGTTCCTGTTTAGCGTCGGATATTACG TCCTCATCTGGCAGCCGTTGAGCGAACGGATAGAACAACAGGAGACAATGTTGCAGCAACTGGTGGCGATGAACACCAGA CTGAGGAGCGCCGCGCCGGATATTATGGCGGCGCGAAAATCCGCCACAACAACGCCTGCGCAGGTATCGCGGGTTATCAG TGACAGCGCTTCCGCGCACTCGGTAGTCATCAAGCGGATAGCCGAGCGTGGGGAGAATATTCAGGTCTGGATAGATCCGG TGGTGTTTAATGACCTGCTGAACTGGTTAAACGCGCTGGATGAAAAGTATGCGCTGCGGGTGACACAAATTGATGCCAGT GCTGCTGAGAAGACTGGGATGGTGAATGTGCAGCGGCTGGAGTTTGGACGGGGGTAA Protein sequence : MLRDKFIHYFQQWRERQLSRGEHWLAQHLAGRSPREKGMLLAAVVFLFSVGYYVLIWQPLSERIEQQETMLQQLVAMNTR LRSAAPDIMAARKSATTTPAQVSRVISDSASAHSVVIKRIAERGENIQVWIDPVVFNDLLNWLNALDEKYALRVTQIDAS AAEKTGMVNVQRLEFGRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| yghD | CAI43907.1 | putative secretion pathway protein | Not tested | LEE | Protein | 2e-78 | 97 |
| gspM | YP_854398.1 | general secretion pathway protein YghD | Not tested | PAI I APEC-O1 | Protein | 5e-77 | 95 |
| gspM | CAE85225.1 | GspM, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-77 | 95 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| O3M_04195 | YP_006768518.1 | general secretion pathway protein YghD | VFG2056 | Protein | 4e-56 | 93 |
