Name : O3M_04145 (O3M_04145) Accession : YP_006768508.1 Strain : Escherichia coli 2009EL-2050 Genome accession: NC_018650 Putative virulence/resistance : Virulence Product : type II secretion protein GspC Function : - COG functional category : - COG ID : - EC number : - Position : 850489 - 851448 bp Length : 960 bp Strand : + Note : COG3031 Type II secretory pathway, component PulC DNA sequence : TTGGCGCGGGTTGTTTTTCGTGACGCACGAATTTATCTCATTCAATGGCTGACAAAAATTCGTCACACTCTTAACCAGAG ACAATCTTTTAATACAGACAAAGAGCATCTGCGAAAAATTGTACGCGGGATGTTCTGGCTGATGCTGCTTATTATTTCTG CAAAAGTGGCGCATTCACTCTGGCGCTATTTCTCCTTTTCTGCGGAATATACGGCTGTTTCCCCATCGGCGAATAAACCG CCCCGTGCGGATGCAAAAACGTTCGATAAAAATGACGTGCAATTAATCAGCCAGCAAAACTGGTTTGGCAAATATCAGCC CGTCGCCACGCCGGTAAAACAACCCGAACCTGTGCCTGTGGCAGAAACGCGTCTTAATGTGGTGCTGCGCGGGATTGCCT TTGGTGCCAGACCCGGCGCGGTTATTGAAGAAGGCGGTAAACAGCAGGTCTATTTGCAGGGTGAAACGCTTGGCTCGCAC AACGCAGTGATTGAGGAAATCAATCGCGACCATGTGATGCTGCGCTATCAGGGAAAAATAGAGCGCCTGAGTCTGGCTGA AGAGGAGCGTTCCACCGTTGCCGTGACCAACAAAAAAGCTGTCAGTGACGAAGCAAAGCAAGCTGTTGCTGAGCCTGCTG CCAGTGCGCCAGTTGAGATCCCGACTGCCGTGCGTCAGGCACTGGCGAAAGATCCGCAGAAAATTTTTAACTATATCCAG CTTACGCCTGTGCGTAAGGAGGGGATTGTCGGTTATGCAGTGAAGCCGGGGGCAGATCGTTCTCTGTTCGATGCCAGCGG TTTCAAGGAAGGCGATATCGCCATTGCGCTAAATCAGCAGGATTTCACTGATCCACGAGCAATGATTGCTCTGATGCGGC AGTTACCTTCAATGGATTCCATTCAACTTACGGTTTTACGCAAGGGTGCGCGCCACGACATTTCCATCGCGCTGCGCTAA Protein sequence : MARVVFRDARIYLIQWLTKIRHTLNQRQSFNTDKEHLRKIVRGMFWLMLLIISAKVAHSLWRYFSFSAEYTAVSPSANKP PRADAKTFDKNDVQLISQQNWFGKYQPVATPVKQPEPVPVAETRLNVVLRGIAFGARPGAVIEEGGKQQVYLQGETLGSH NAVIEEINRDHVMLRYQGKIERLSLAEEERSTVAVTNKKAVSDEAKQAVAEPAASAPVEIPTAVRQALAKDPQKIFNYIQ LTPVRKEGIVGYAVKPGADRSLFDASGFKEGDIAIALNQQDFTDPRAMIALMRQLPSMDSIQLTVLRKGARHDISIALR |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
gspC | CAE85235.1 | GspC, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 5e-119 | 98 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
O3M_04145 | YP_006768508.1 | type II secretion protein GspC | VFG2046 | Protein | 2e-117 | 95 |