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Name : O3M_00390 (O3M_00390) Accession : YP_006767763.1 Strain : Escherichia coli 2009EL-2050 Genome accession: NC_018650 Putative virulence/resistance : Resistance Product : tetracycline efflux protein Function : - COG functional category : - COG ID : - EC number : - Position : 67563 - 68837 bp Length : 1275 bp Strand : - Note : COG0477 Permeases of the major facilitator superfamily DNA sequence : ATGTCCACCAACTTATCAGTGATAAAGAATCCGCGCGTTCAATCGGACCAGCGGAGGCTGGTCCGGAGGCCAGACGTGAA ACCCAACAGACCCCTGATCGTAATTCTGAGCACTGTCGCGCTCGACGCTGTCGGCATCGGCCTGATTATGCCGGTGCTGC CGGGCCTCCTGCGCGATCTGGTTCACTCGAACGACGTCACCGCCCACTATGGCATTCTGCTGGCGCTGTATGCGTTGATG CAATTTGCCTGCGCACCTGTGCTGGGCGCGCTGTCGGATCGTTTCGGGCGGCGGCCGGTCTTGCTCGTCTCGCTGGCCGG CGCTGCTGTCGACTACGCCATCATGGCGACGGCGCCTTTCCTTTGGGTTCTCTATATCGGGCGGATCGTGGCCGGCATCA CCGGGGCGACTGGGGCGGTAGCCGGCGCTTATATTGCCGATATCACTGATGGCGATGAGCGCGCGCGGCACTTCGGCTTC ATGAGCGCCTGTTTCGGGTTCGGGATGGTCGCGGGACCTGTGCTCGGTGGGCTGATGGGCGGTTTCTCCCCCCACGCTCC GTTCTTCGCCGCGGCAGCCTTGAACGGCCTCAATTTCCTGACGGGCTGTTTCCTTTTGCCGGAGTCGCACAAAGGCGAAC GCCGGCCGTTACGCCGGGAGGCTCTCAACCCGCTCGCTTCGTTCCGGTGGGCCCGGGGCATGACCGTCGTCGCCGCCCTG ATGGCGGTCTTCTTCATCATGCAACTTGTCGGACAGGTGCCGGCCGCGCTTTGGGTCATTTTCGGCGAGGATCGCTTTCA CTGGGACGCGACCACGATCGGCATTTCGCTTGCCGCATTTGGCATTCTGCATTCACTCGCCCAGGCAATGATCACCGGCC CTGTAGCCGCCCGGCTCGGCGAAAGGCGGGCACTCATGCTCGGAATGATTGCCGACGGCACAGGCTACATCCTGCTTGCC TTCGCGACACGGGGATGGATGGCGTTCCCGATCATGGTCCTGCTTGCTTCGGGTGGCATCGGAATGCCGGCGCTGCAAGC AATGTTGTCCAGGCAGGTGGATGAGGAACGTCAGGGGCAGCTGCAAGGCTCACTGGCGGCGCTCACCAGCCTGACCTCGA TCGTCGGACCCCTCCTCTTCACGGCGATCTATGCGGCTTCTATAACAACGTGGAACGGGTGGGCATGGATTGCAGGCGCT GCCCTCTACTTGCTCTGCCTGCCGGCGCTGCGTCGCGGGCTTTGGAGCGGCGCAGGGCAACGAGCCGATCGCTGA Protein sequence : MSTNLSVIKNPRVQSDQRRLVRRPDVKPNRPLIVILSTVALDAVGIGLIMPVLPGLLRDLVHSNDVTAHYGILLALYALM QFACAPVLGALSDRFGRRPVLLVSLAGAAVDYAIMATAPFLWVLYIGRIVAGITGATGAVAGAYIADITDGDERARHFGF MSACFGFGMVAGPVLGGLMGGFSPHAPFFAAAALNGLNFLTGCFLLPESHKGERRPLRREALNPLASFRWARGMTVVAAL MAVFFIMQLVGQVPAALWVIFGEDRFHWDATTIGISLAAFGILHSLAQAMITGPVAARLGERRALMLGMIADGTGYILLA FATRGWMAFPIMVLLASGGIGMPALQAMLSRQVDEERQGQLQGSLAALTSLTSIVGPLLFTAIYAASITTWNGWAWIAGA ALYLLCLPALRRGLWSGAGQRADR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tetA | CAJ77066.1 | Tetracycline resistance protein | Not tested | AbaR1 | Protein | 3e-174 | 100 |
| tetA(A) | ACN81011.1 | TetA(A) | Not tested | AbaR5 | Protein | 4e-174 | 100 |
| tetA(A) | AGK07027.1 | TetA(A) | Not tested | SGI1 | Protein | 1e-161 | 99 |
| tetA(A) | AGK07085.1 | TetA(A) | Not tested | SGI1 | Protein | 1e-161 | 99 |
| tetA | YP_006098396.1 | tetracycline resistance protein | Not tested | Tn2411 | Protein | 2e-161 | 99 |
| tetA(A) | ACK44537.1 | TetA(A) | Not tested | SGI1 | Protein | 1e-161 | 99 |
| tet(G) | AAK02051.1 | tetracycline resistance protein | Not tested | SGI1 | Protein | 3e-101 | 63 |
| tetA(G) | ABZ01843.1 | TetA(G) | Not tested | SGI2 | Protein | 3e-101 | 63 |
| tetA(G) | AGK06974.1 | TetA(G) | Not tested | SGI1 | Protein | 3e-101 | 63 |
| tetA(G) | AGK07104.1 | TetA(G) | Not tested | SGI1 | Protein | 3e-101 | 63 |
| tetA | CAJ77034.1 | Tetracycline resistance protein | Not tested | AbaR1 | Protein | 1e-103 | 63 |
| tetA | YP_005797160.1 | tetracycline resistance protein, class G (TETA(G)) | Not tested | AbaR4e | Protein | 1e-74 | 49 |
| tetB | AEA34667.1 | tetracycline resistance determinant | Not tested | Not named | Protein | 5e-75 | 48 |
| tetA(B) | AEZ06045.1 | tetracycline efflux protein | Not tested | Tn6167 | Protein | 6e-75 | 48 |
| tetA(B) | AAL08445.1 | tetracycline resistance protein TetA(B) | Not tested | SRL | Protein | 5e-75 | 48 |
| BJAB07104_00277 | YP_008207742.1 | Permeases of the major facilitator superfamily | Not tested | AbaR25 | Protein | 9e-75 | 48 |
| BJAB0868_00281 | YP_008211607.1 | Permeases of the major facilitator superfamily | Not tested | AbaR26 | Protein | 9e-75 | 48 |
| tetA(B) | AEQ20905.1 | tetracycline resistance protein | Not tested | Tn6166 | Protein | 9e-75 | 48 |
| tet(H) | YP_005176248.1 | tetracycline efflux protein, class H | Not tested | ICEPmu1 | Protein | 1e-68 | 47 |
| ABZJ_00260 | YP_005524216.1 | Tetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter) | Not tested | AbaR22 | Protein | 1e-75 | 46 |
| tetA(B) | AFH57202.1 | tetracycline resistance protein | Not tested | AbaR4a | Protein | 2e-75 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| O3M_00390 | YP_006767763.1 | tetracycline efflux protein | NC_010410.6002597.p0 | Protein | 2e-174 | 100 |
| O3M_00390 | YP_006767763.1 | tetracycline efflux protein | CP001485.1.gene2821. | Protein | 2e-174 | 100 |
| O3M_00390 | YP_006767763.1 | tetracycline efflux protein | NC_011586.7045189.p0 | Protein | 2e-151 | 100 |
| O3M_00390 | YP_006767763.1 | tetracycline efflux protein | X75761.gene.p01 | Protein | 1e-160 | 99 |
| O3M_00390 | YP_006767763.1 | tetracycline efflux protein | AF534183.gene.p01 | Protein | 5e-171 | 99 |
| O3M_00390 | YP_006767763.1 | tetracycline efflux protein | Y19114.gene.p01 | Protein | 9e-128 | 80 |
| O3M_00390 | YP_006767763.1 | tetracycline efflux protein | NC_010410.6002612.p0 | Protein | 7e-104 | 63 |
| O3M_00390 | YP_006767763.1 | tetracycline efflux protein | AF133140.gene.p01 | Protein | 7e-104 | 63 |
| O3M_00390 | YP_006767763.1 | tetracycline efflux protein | AF133139.gene.p01 | Protein | 6e-106 | 63 |
| O3M_00390 | YP_006767763.1 | tetracycline efflux protein | AF070999.gene.p01 | Protein | 2e-88 | 54 |
| O3M_00390 | YP_006767763.1 | tetracycline efflux protein | AY264780.2.gene3.p01 | Protein | 3e-81 | 54 |
| O3M_00390 | YP_006767763.1 | tetracycline efflux protein | Y19116.gene.p01 | Protein | 5e-78 | 53 |
| O3M_00390 | YP_006767763.1 | tetracycline efflux protein | L06940.gene.p01 | Protein | 1e-79 | 53 |
| O3M_00390 | YP_006767763.1 | tetracycline efflux protein | AY743590.gene.p01 | Protein | 7e-73 | 50 |
| O3M_00390 | YP_006767763.1 | tetracycline efflux protein | L06798.gene.p01 | Protein | 7e-69 | 49 |
| O3M_00390 | YP_006767763.1 | tetracycline efflux protein | AF121000.gene.p01 | Protein | 6e-70 | 48 |
| O3M_00390 | YP_006767763.1 | tetracycline efflux protein | AJ420072.gene.p01 | Protein | 7e-68 | 48 |
| O3M_00390 | YP_006767763.1 | tetracycline efflux protein | CP004022.1.gene2534. | Protein | 6e-70 | 48 |
| O3M_00390 | YP_006767763.1 | tetracycline efflux protein | AF038993.gene.p01 | Protein | 2e-70 | 48 |
| O3M_00390 | YP_006767763.1 | tetracycline efflux protein | AB084246.gene.p01 | Protein | 4e-75 | 48 |
| O3M_00390 | YP_006767763.1 | tetracycline efflux protein | V00611.gene.p01 | Protein | 7e-75 | 48 |
| O3M_00390 | YP_006767763.1 | tetracycline efflux protein | NC_010558.1.6275971. | Protein | 3e-75 | 48 |
| O3M_00390 | YP_006767763.1 | tetracycline efflux protein | Y15510.gene.p01 | Protein | 2e-69 | 47 |
| O3M_00390 | YP_006767763.1 | tetracycline efflux protein | AF090987.gene.p01 | Protein | 2e-64 | 47 |
| O3M_00390 | YP_006767763.1 | tetracycline efflux protein | NC_011595.7059241.p0 | Protein | 1e-54 | 44 |
| O3M_00390 | YP_006767763.1 | tetracycline efflux protein | NC_011586.7043399.p0 | Protein | 1e-54 | 44 |
| O3M_00390 | YP_006767763.1 | tetracycline efflux protein | NC_010410.6003291.p0 | Protein | 1e-54 | 44 |
| O3M_00390 | YP_006767763.1 | tetracycline efflux protein | AJ250203.gene.p01 | Protein | 1e-63 | 43 |
| O3M_00390 | YP_006767763.1 | tetracycline efflux protein | NC_009085.4918440.p0 | Protein | 2e-48 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| O3M_00390 | YP_006767763.1 | tetracycline efflux protein | VFG1036 | Protein | 3e-75 | 48 |
