Gene Information

Name : O3M_21890 (O3M_21890)
Accession : YP_006771997.1
Strain : Escherichia coli 2009EL-2050
Genome accession: NC_018650
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4521540 - 4522925 bp
Length : 1386 bp
Strand : +
Note : COG3436 Transposase and inactivated derivatives

DNA sequence :
ATGAACGACATCTCTTCTGACGACATCTTCCTGCTGAAACAGCGCCTGGCCGAACAGGAAGCGCTGATCCACGCCCTGCA
GGAAAAGCTGAGCAACCGGGAGCGCGAAATAGACCATCTGCAGGCGCAGCTGGATAAACTCCGCCGGATGAACTTCGGCA
GTCGTTCCGAAAAAGTCTCCCGCCGTATCGCACAAATGGAAGCCGATCTGAACCGGCTTCAGAAAGAGAGCGATACGCTG
ACTGGTAGGGTGTATGACCCGGCAGTACAGCGTCCGTTGCGTCAGACCCGCACCCGTAAGCCGTTCCCTGAATCACTACC
CCGTGACGAAAAGCGACTGTTGCCTGCGGCGCCGTGCTGCCCGAACTGCGGCGGTTCACTGAGCTATCTGGGCGAGGATA
CCGCCGAACAGCTGGAGTTGATGCGTAGCGCCTTCCGGGTTATCCGGACGGTACGGGAAAAACATGCCTGTACTCAGTGC
GATGCCATCGTGCAGGCACCTGCACCTTCGCGGCCCATCGAGCGGGGTATCGCCGGACCGGGGCTGCTGGCCCGCGTGCT
GACCTCGAAGTATGCAGAGCACACCCCGCTGTATTGCCAGTCAGAAATATACGGCCGGCAAGGTGTGGAGCTGAGCCGTT
CACTGCTGTCGGGCTGGGTGGATGCATGCTGCCGGCTGCTGTCTCCGCTGGAAGAGGCGCTTCATGGCTATGTCATGACT
GACGGCAAACTCCATGCCGATGATACCCCGGTCCAGGTACTGCTGCCGGGTAATAAGAAGACGAAGACCGGGCGGTTGTG
GGCGTATGTTCGTGATGACCGCAATGCCGGGTCAGCGTTGGCACCTGCAGTGAGGTTCGCTTACAGCCCGGACAGAAAAG
GCATCCATCCGCAGACTCATCTTGCTTGCTTCAGCGGTGTGCTGCAAGCGGATGCGTACGCCGGGTTCAACGAGCTGTAT
CGCAATGGTGGGATAACGGAAGCTGCCTGCTGGGCTCATGCCCGCCGAAAGATCCACGATGTGCACGTCCGCATCCCGTC
AGCACTGACGGAAGAAGCCCTGGAGCAGATCGGTCAGTTGTACGCCATAGAGGCGGATATAAGGGGAATGCCGGCAGAGC
AGCGGCTTGCTGAACGTCAGCGAAAAACGAAACCGCTGTTGAAATCCCTGGAAAGCTGGTTGCGTGAAAAGATGAAGACC
CTGTTCTTCGGCTCTGGCCATGGTGGTGAGCGGGGAGCGCTACTGTACAGCCTGATCGGGACGTGCAAACTGAATGACGT
GGATCCAGAAAGCTACCTTCGCCATGTGTCTGGCGTCATAGCAGACTGGCCGGTCAACCGGGTCAGCGAACTGCTTCCGT
GGCGCATAGCACTGCCAGCTGAATAA

Protein sequence :
MNDISSDDIFLLKQRLAEQEALIHALQEKLSNREREIDHLQAQLDKLRRMNFGSRSEKVSRRIAQMEADLNRLQKESDTL
TGRVYDPAVQRPLRQTRTRKPFPESLPRDEKRLLPAAPCCPNCGGSLSYLGEDTAEQLELMRSAFRVIRTVREKHACTQC
DAIVQAPAPSRPIERGIAGPGLLARVLTSKYAEHTPLYCQSEIYGRQGVELSRSLLSGWVDACCRLLSPLEEALHGYVMT
DGKLHADDTPVQVLLPGNKKTKTGRLWAYVRDDRNAGSALAPAVRFAYSPDRKGIHPQTHLACFSGVLQADAYAGFNELY
RNGGITEAACWAHARRKIHDVHVRIPSALTEEALEQIGQLYAIEADIRGMPAEQRLAERQRKTKPLLKSLESWLREKMKT
LFFGSGHGGERGALLYSLIGTCKLNDVDPESYLRHVSGVIADWPVNRVSELLPWRIALPAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08460.1 unknown Not tested SRL Protein 0.0 99
l0015 CAD33775.1 L0015 protein Not tested PAI I 536 Protein 1e-160 99
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 6e-163 99
unnamed AAC31494.1 L0015 Not tested LEE Protein 0.0 97
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 0.0 97
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 0.0 97
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 0.0 97
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 0.0 97
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 0.0 97
tnp AEA34686.1 transposase Not tested Not named Protein 0.0 97
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 0.0 97
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 0.0 97
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 0.0 95
unnamed AAL57570.1 unknown Not tested LEE Protein 0.0 95
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-121 74
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 3e-107 63
s0025 CAD33772.1 IS66-like transposase Not tested PAI I 536 Protein 2e-88 61
tnp AEA34687.1 IS66 family transposase Not tested Not named Protein 3e-100 59
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 2e-100 58
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 2e-98 54
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 3e-98 53
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 7e-100 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O3M_21890 YP_006771997.1 transposase VFG1051 Protein 0.0 99
O3M_21890 YP_006771997.1 transposase VFG1516 Protein 8e-161 99
O3M_21890 YP_006771997.1 transposase VFG0793 Protein 0.0 97
O3M_21890 YP_006771997.1 transposase VFG1700 Protein 1e-121 74
O3M_21890 YP_006771997.1 transposase VFG1736 Protein 3e-110 64
O3M_21890 YP_006771997.1 transposase VFG1513 Protein 1e-88 61