Gene Information

Name : O3M_21880 (O3M_21880)
Accession : YP_006771995.1
Strain : Escherichia coli 2009EL-2050
Genome accession: NC_018650
Putative virulence/resistance : Unknown
Product : transposase, IS3 family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4520745 - 4521146 bp
Length : 402 bp
Strand : +
Note : COG2963 Transposase and inactivated derivatives

DNA sequence :
GTGGGAACCAAAGTGTCAGATATGCAGAAAAATGTGAATCCCGGCAGGCGAAAAGGCTGCCCTAATTATCCTCCCGAATT
TAAACAGCAGCTCGTTGCTGCCTCCTGTGAACCCGGGATATCCATCTCAAAACTTGCTCTTGAAAATGGCATTAACGCCA
ATCTGTTGTTCAAATGGCGACAACAATTGCGTGAGGGAAAGCTGCTATTACCTTCTTCAGAGAGCCCCCAGCTACTTCCT
GTGACTCTCGATGCAGCTGCCGAACAGCCAGAATCGCTCGCAGAGGACCCGGAAACCCTCAGTATCAGCTGTGAGGTAAC
GTTCCGGCACGGGACGCTCCGCTTCAATGGCAATGTCAGCGAAAAGCTCCTGACTCTGCTGATACAGGAACTGAAGCGAT
GA

Protein sequence :
MGTKVSDMQKNVNPGRRKGCPNYPPEFKQQLVAASCEPGISISKLALENGINANLLFKWRQQLREGKLLLPSSESPQLLP
VTLDAAAEQPESLAEDPETLSISCEVTFRHGTLRFNGNVSEKLLTLLIQELKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ACU09437.1 IS66 family element orf1 Not tested LEE Protein 7e-46 99
unnamed AAC31492.1 L0013 Not tested LEE Protein 4e-49 99
c3577 NP_755452.1 hypothetical protein Not tested PAI I CFT073 Protein 5e-49 99
Z5096 NP_290247.1 prophage-associated protein Not tested LEE Protein 5e-49 99
ECs4545 NP_312572.1 hypothetical protein Not tested LEE Protein 5e-49 99
unnamed AAL99257.1 unknown Not tested LEE Protein 7e-46 99
unnamed AAL08462.1 unknown Not tested SRL Protein 2e-48 98
l0013 CAD33777.1 L0013 protein Not tested PAI I 536 Protein 9e-46 98
c3560 NP_755435.1 hypothetical protein Not tested PAI I CFT073 Protein 9e-23 55
ECUMN_3326 YP_002414006.1 putative transposase Not tested Not named Protein 9e-23 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O3M_21880 YP_006771995.1 transposase, IS3 family protein VFG1708 Protein 1e-49 99
O3M_21880 YP_006771995.1 transposase, IS3 family protein VFG0791 Protein 1e-49 99
O3M_21880 YP_006771995.1 transposase, IS3 family protein VFG1053 Protein 8e-49 98
O3M_21880 YP_006771995.1 transposase, IS3 family protein VFG1518 Protein 4e-46 98
O3M_21880 YP_006771995.1 transposase, IS3 family protein VFG1697 Protein 3e-23 55