Gene Information

Name : O3M_01560 (O3M_01560)
Accession : YP_006767993.1
Strain : Escherichia coli 2009EL-2050
Genome accession: NC_018650
Putative virulence/resistance : Virulence
Product : DNA-binding transcriptional activator CusR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 320336 - 321016 bp
Length : 681 bp
Strand : -
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGAAAATATTGATCGTCGAAGACGAAATTAAAACAGGTGAATATCTCAGCAAAGGGCTTACAGAGGCAGGGTTCGTAGT
GGATCACGCTGATAATGGTCTTACCGGATATCATCTCGCCATGACAGCCGAGTATGATTTAGTCATTCTGGATATCATGC
TACCTGATGTGAACGGCTGGGATATCATCCGCATGCTGCGCACTGCCGGAAAGGGTATGCCGGTCTTACTGCTGACAGCC
CTCGGCACGATCGAACATAGGGTCAAAGGACTGGAACTGGGTGCGGACGATTATCTGGTTAAACCCTTTGCGTTTGCCGA
ACTGCTCGCCCGGGTGAGAACCCTTCTGAGGCGGGGAAACACGATGATCACGGAAAGCCAGTTTAAGGTGGCTGACCTCT
CGATTGATCTCGTATCCAGAAAAGTCAGTCGCGCCGGAAACCGCATTGTGCTCACCAGTAAAGAGTTCAGCCTGCTGGAA
TTCTTCATTCGCCATCAGGGAGAGGTTCTTCCCCGCTCCCTGATTGCCTCTCAGGTCTGGGACATGAATTTTGACAGCGA
CACTAATGCGATCGATGTCGCAGTAAAGCGACTCCGCGCTAAAATAGACAACGATTACGAGACAAAGCTGATCCAGACAG
TCCGGGGCGTGGGCTACATGCTGGAGGTCCCGGATGCATAG

Protein sequence : 
MKILIVEDEIKTGEYLSKGLTEAGFVVDHADNGLTGYHLAMTAEYDLVILDIMLPDVNGWDIIRMLRTAGKGMPVLLLTA
LGTIEHRVKGLELGADDYLVKPFAFAELLARVRTLLRRGNTMITESQFKVADLSIDLVSRKVSRAGNRIVLTSKEFSLLE
FFIRHQGEVLPRSLIASQVWDMNFDSDTNAIDVAVKRLRAKIDNDYETKLIQTVRGVGYMLEVPDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-55 54
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 4e-55 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O3M_01560 YP_006767993.1 DNA-binding transcriptional activator CusR BAC0347 Protein 1e-94 93
O3M_01560 YP_006767993.1 DNA-binding transcriptional activator CusR BAC0111 Protein 1e-95 88
O3M_01560 YP_006767993.1 DNA-binding transcriptional activator CusR BAC0083 Protein 5e-71 62
O3M_01560 YP_006767993.1 DNA-binding transcriptional activator CusR BAC0638 Protein 4e-65 62
O3M_01560 YP_006767993.1 DNA-binding transcriptional activator CusR BAC0197 Protein 1e-65 60
O3M_01560 YP_006767993.1 DNA-binding transcriptional activator CusR BAC0308 Protein 3e-62 58
O3M_01560 YP_006767993.1 DNA-binding transcriptional activator CusR BAC0125 Protein 8e-64 56
O3M_01560 YP_006767993.1 DNA-binding transcriptional activator CusR HE999704.1.gene1202. Protein 3e-36 41
O3M_01560 YP_006767993.1 DNA-binding transcriptional activator CusR AE000516.2.gene3505. Protein 2e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O3M_01560 YP_006767993.1 DNA-binding transcriptional activator CusR VFG0596 Protein 5e-56 54
O3M_01560 YP_006767993.1 DNA-binding transcriptional activator CusR VFG1390 Protein 1e-42 43