Gene Information

Name : O3M_09465 (O3M_09465)
Accession : YP_006769548.1
Strain : Escherichia coli 2009EL-2050
Genome accession: NC_018650
Putative virulence/resistance : Unknown
Product : transposase ORF 1, IS66 family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1979434 - 1980969 bp
Length : 1536 bp
Strand : +
Note : COG3436 Transposase and inactivated derivatives; IS66 family protein

DNA sequence :
ATGAACGACACCTCTTCTGACGACATCCTTCTGCTGAAACAGCGCCTGGCCGAACAGGAAGCGTTGATCCACGCCCTGCA
GGAAAAGCTGAGCAACCGGGAACGCGAAATAGACCATCTGCAGGCGCAACTGGATAAGCTGCGCCGGATGAACTTCGGCA
GTCGTTCCGAAAAGGTATCCCGCCGTATCGCGCAAATGGAAGCTGACCTGAACCTGCTGCAGCAGGAAAGCGATACGCTG
ACCGGCCGGGTGGATGACCCGGCAGTGCAGCGCCCGCTGCGTCAGACCCGCACCCGCAAACCGTTCCCTGAGTCACTCCC
ACGGGATGAGAAGCGGCTGCTGCCGACTGAGCCGTGTTGCCCGGAGTGCGGTGGTTCGCTGAGTTACCTGGGTGAGGATG
CCGCCGAACAGCTGGAGCTGATGCGCAGCGCCTTCCGGGTTATCCGGACAGTCCGTGAAAAGCATGCCTGCCGTCGGTGC
GATCGCATCGTTCAGGCCCCGGCTCCTTCGCGCCCCATCGAACGGGGGATCGCCGGACCGGGGCTGCTGGCCCGAGTGCT
GACCTCAAAGTATGCAGAGCACATACCGCTGTATCGCCAGTCGGAGATCTATGCCCGCCAGGGTGTAGTGTTGAGTCGTT
CTGTACTGTCGGGCTGGGTGGATGCGTGTTGTCGTCTGCTGGCACCGCTGGATGAAGCCCTTCAGCACTATGTCCTGACC
GACGGCAAACTCCATGCTGACGATATGCCTGTCCCGGTGCTGTTGCCGGGCAATAAGAAGACGAAGACCGGGCGCTTATG
GACGTACGTTCGAGACGACCGCAACGCCGGATCAGCGCTGGCCCCCGCAGTGTGGTTCGCTTACAGCCCGGACAGAAAAG
GTATCCACCCTCAGACCCATCTTGCAGGCTTCAGTGGCGTACTGCAGGCTGATGCCTACGCCGGGTTCAACGAGCTCTAC
CGCGACGGCCATATAAAGGAAGCCACGTGCTGGGCCCATGCCCGCCGAAAAATCCACGATGTTCACGTCCGTACCCCGTC
AGCCCTGACGGAGGAGGCGCTGAAACGGATCGGCGAGCTGTATGCCATCGAGTCGGAGCTCAGAGGTAAAAGAGCAGAGG
AACGGCAGGCAGTCCGGCACCAAAAAGTGCTGCCGCTGCTGGCGTCACTGGAGGGGGGGCTGCGGGAGAAACAGAAAACC
CTCTCAAGGCACTCAGAACTGGTGAAGGCGTTCGGGTATGCGCTGAACCAGTGGCCGGCGCTGACCCGCTATGCAGAAGA
TGGCTGGGTGGAGGTGGATAATAACATTGCCGAAAACGCCCTACGACTGGTCAGTCTGGGGAGAAAAAACTGGCTGTTCT
TCGGCTCGGATCATGGTGGTGAGCGCGGTGCGTCACTGTACAGTCTTATCGGGACGTGCAAATTAAACGGCGTGGATCCG
GAACGCTATCTGCATCATGTACTTGATGTCATCGCCGACTGGCCTGTGAACCGGGTGGGTGCTCTGCTCCCGTGGCGGGT
TACTCTGCCTGCCTGA

Protein sequence :
MNDTSSDDILLLKQRLAEQEALIHALQEKLSNREREIDHLQAQLDKLRRMNFGSRSEKVSRRIAQMEADLNLLQQESDTL
TGRVDDPAVQRPLRQTRTRKPFPESLPRDEKRLLPTEPCCPECGGSLSYLGEDAAEQLELMRSAFRVIRTVREKHACRRC
DRIVQAPAPSRPIERGIAGPGLLARVLTSKYAEHIPLYRQSEIYARQGVVLSRSVLSGWVDACCRLLAPLDEALQHYVLT
DGKLHADDMPVPVLLPGNKKTKTGRLWTYVRDDRNAGSALAPAVWFAYSPDRKGIHPQTHLAGFSGVLQADAYAGFNELY
RDGHIKEATCWAHARRKIHDVHVRTPSALTEEALKRIGELYAIESELRGKRAEERQAVRHQKVLPLLASLEGGLREKQKT
LSRHSELVKAFGYALNQWPALTRYAEDGWVEVDNNIAENALRLVSLGRKNWLFFGSDHGGERGASLYSLIGTCKLNGVDP
ERYLHHVLDVIADWPVNRVGALLPWRVTLPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 0.0 88
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 0.0 88
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 0.0 88
unnamed AAC31494.1 L0015 Not tested LEE Protein 0.0 88
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 0.0 88
unnamed AAL08460.1 unknown Not tested SRL Protein 2e-162 88
tnp AEA34686.1 transposase Not tested Not named Protein 0.0 87
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 0.0 87
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 0.0 87
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 0.0 87
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-153 87
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 0.0 86
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 0.0 86
unnamed AAL57570.1 unknown Not tested LEE Protein 0.0 86
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 9e-145 64
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 3e-148 63
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 3e-148 63
s0025 CAD33772.1 IS66-like transposase Not tested PAI I 536 Protein 2e-107 62
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 2e-140 60
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 3e-129 56
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 2e-117 55
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 3e-117 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O3M_09465 YP_006769548.1 transposase ORF 1, IS66 family protein VFG0793 Protein 0.0 88
O3M_09465 YP_006769548.1 transposase ORF 1, IS66 family protein VFG1051 Protein 1e-162 88
O3M_09465 YP_006769548.1 transposase ORF 1, IS66 family protein VFG1700 Protein 6e-154 87
O3M_09465 YP_006769548.1 transposase ORF 1, IS66 family protein VFG1736 Protein 8e-122 63
O3M_09465 YP_006769548.1 transposase ORF 1, IS66 family protein VFG1513 Protein 1e-107 62