Gene Information

Name : O3M_00555 (O3M_00555)
Accession : YP_006767796.1
Strain : Escherichia coli 2009EL-2050
Genome accession: NC_018650
Putative virulence/resistance : Virulence
Product : Tn21 resolvase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 89947 - 90501 bp
Length : 555 bp
Strand : +
Note : COG1961 Site-specific recombinases, DNA invertase Pin homologs

DNA sequence :
GTGCCGCGCATTGGGTATATCAGGGTCAGCACCTTCGACCAGAACCCGGAACGGCAACTGGAAGGCGTCAAGGTTGATCG
CGCTTTTAGCGACAAGGCATCCGGCAAGGATGTCAAGCGTCCGCAACTGGAAGCGCTGATAAGCTTCGCCCGCACCGGCG
ACACCGTGGTGGTGCATAGCATGGATCGCCTGGCGCGCAATCTCGATGATTTGCGCCGGATCGTGCAAACGCTGACACAA
CGCGGCGTGCATATCGAATTCGTCAAGGAACACCTCAGTTTTACTGGCGAAGACTCTCCGATGGCGAACCTGATGCTCTC
GGTGATGGGCGCGTTCGCCGAGTTCGAGCGCGCCCTGATCCGCGAGCGTCAGCGCGAGGGTATTGCGCTCGCCAAGCAAC
GCGGGGCTTACCGTGGCAGGAAGAAATCCCTGTCGTCTGAGCGTATTGCCGAACTGCGCCAACGTGTCGAGGCTGGCGAG
CAAAAGACCAAGCTTGCTCGTGAATTCGGAATCAGTCGCGAAACCCTGTATCAATACTTGAGAACGGATCAGTAA

Protein sequence :
MPRIGYIRVSTFDQNPERQLEGVKVDRAFSDKASGKDVKRPQLEALISFARTGDTVVVHSMDRLARNLDDLRRIVQTLTQ
RGVHIEFVKEHLSFTGEDSPMANLMLSVMGAFAEFERALIRERQREGIALAKQRGAYRGRKKSLSSERIAELRQRVEAGE
QKTKLAREFGISRETLYQYLRTDQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 4e-74 99
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 3e-74 99
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 3e-74 99
tnpR ACF06154.1 resolvase Not tested Tn5036-like Protein 9e-63 83
tnpR ACY75537.1 TnpR Not tested Tn6060 Protein 7e-62 82
res YP_005124341.1 DNA-invertase Not tested Not named Protein 2e-23 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O3M_00555 YP_006767796.1 Tn21 resolvase VFG1030 Protein 1e-74 99