Gene Information

Name : O3M_05215 (O3M_05215)
Accession : YP_006768715.1
Strain : Escherichia coli 2009EL-2050
Genome accession: NC_018650
Putative virulence/resistance : Virulence
Product : type III secretion apparatus protein SpaR/YscT/HrcT
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1067124 - 1067891 bp
Length : 768 bp
Strand : +
Note : COG4791 Type III secretory pathway, component EscT

DNA sequence : 
ATGGAGGAGGCGATACTCTATCAGTTGCATAGTCTGCTGGCTGCTACAGCGCTCGGTTTTTGCCGATTGGCACCAACTTT
CTATTTGTTACCATTTTTCGCCAGTGGGAATATACCAACAGTAGTCCGTCATCCAATAATAATAGTGGTATCATGTGCAT
TATTTCAGCATTACCACTATGAATTATCGACCTTAAATGAAATCGATATCGCTTTGTTTGCTGCCAGAGAAATTATCATA
GGGCTGTTCATTGCTTGCTTATTATCATCCCCGTTTTGGATTTTCCTTGCTATAGGTAGTTTTATCGATAACCAACGTGG
TGCAACGTTAAGTAGTACTTTGGATCCTGCTACTGGTGTCGATACTTCGGAATTAGCAAGATTATTTAACCTATTCTCTG
CAGCGGTTTATCTTACTAACGGTGGATTGAACTTTATTCTGGAAACTCTTTGGCAAAGTTATAATTTATGGCCTTCAGGC
AATTTTAATTTTCCTAAATTAGAGCCTTTATTCTCATATATTAATAACATAATGACTCATACTATCGTTTACGCAAGCCC
CGTGATTGCCGTTATGCTGGGCGGTGAGGCTGTCCTGGGATTGCTGGCACGTTATGCTTCACAACTAAATGCTTTTGCCA
TTTCACTGACTGTCAAAAGTGCGCTGGCATTTTTAATATTAATTATTTATTTTGGCCCAATACTGGCTGAACGAGTAATG
CCGTTATCCTTTTTCCCAGAACAATTGCAACTATACATTGAGAAATAG

Protein sequence : 
MEEAILYQLHSLLAATALGFCRLAPTFYLLPFFASGNIPTVVRHPIIIVVSCALFQHYHYELSTLNEIDIALFAAREIII
GLFIACLLSSPFWIFLAIGSFIDNQRGATLSSTLDPATGVDTSELARLFNLFSAAVYLTNGGLNFILETLWQSYNLWPSG
NFNFPKLEPLFSYINNIMTHTIVYASPVIAVMLGGEAVLGLLARYASQLNAFAISLTVKSALAFLILIIYFGPILAERVM
PLSFFPEQLQLYIEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
epaR AAZ31291.1 EpaR Virulence ETT2 Protein 6e-84 100
spaR NP_457282.1 secretory protein (associated with virulence) Virulence SPI-1 Protein 1e-41 48
spaR NP_806491.1 virulence-associated secretory protein Virulence SPI-1 Protein 1e-41 48
spaR NP_461809.1 needle complex export protein Virulence SPI-1 Protein 5e-42 48
spaR YP_217807.1 surface presentation of antigens; secretory proteins Virulence SPI-1 Protein 1e-40 47
spaR AAS66867.1 SpaR Not tested SSR-2 Protein 5e-31 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O3M_05215 YP_006768715.1 type III secretion apparatus protein SpaR/YscT/HrcT VFG0549 Protein 2e-42 48
O3M_05215 YP_006768715.1 type III secretion apparatus protein SpaR/YscT/HrcT VFG1014 Protein 1e-35 43