|
Name : spaP (O3M_05205) Accession : YP_006768713.1 Strain : Escherichia coli 2009EL-2050 Genome accession: NC_018650 Putative virulence/resistance : Virulence Product : type III secretion system protein SpaP Function : - COG functional category : - COG ID : - EC number : - Position : 1066187 - 1066852 bp Length : 666 bp Strand : + Note : COG4790 Type III secretory pathway, component EscR DNA sequence : ATGTCAAATACCATTTCGCTGATAGCTATACTAACATTATTTACACTATTGCCGTTTATAATAGCATCCGGGACATATTT TATTAAATTCTCGATTGTTTTTGTTATTGTCCGAAACGCGCTGGGGCTTCAGCAAGTGCCATCAAATATGACACTTAATG GGGTTGCTTTGCTATTGTCAATGTTTGTAATGATGCCGGTTGGGACGGAAATATATTATAACAGTCAGAATGAGAATCTT TCATTCAATAATGTAGCGTCGGTTGTTAATTTTGTTGAGACAGGCATGAGTGGTTATAAATCATATTTGATAAAATATTC TGAACCTGAGTTGGTTAGCTTTTTTGAAAAGATTCAGAAGGTGAATAGTTCTGAAGACAATGAAGAGATAATCGATGATG ATAATATTTCAATTTTCTCGTTACTGCCCGCATATGCATTGAGTGAGATAAAAAGTGCATTTATTATAGGTTTTTATATC TATTTACCCTTTGTCGTAGTGGATCTGGTTATATCCAGCGTTCTGTTAACGTTAGGTATGATGATGATGAGCCCGGTAAT CATATCTACACCGATAAAATTAATTCTATTTGTCGCTATGGACGGTTGGACAATGTTATCAAAAGGACTCATTTTACAAT ATTTTGACCTATCCATTAATCCCTGA Protein sequence : MSNTISLIAILTLFTLLPFIIASGTYFIKFSIVFVIVRNALGLQQVPSNMTLNGVALLLSMFVMMPVGTEIYYNSQNENL SFNNVASVVNFVETGMSGYKSYLIKYSEPELVSFFEKIQKVNSSEDNEEIIDDDNISIFSLLPAYALSEIKSAFIIGFYI YLPFVVVDLVISSVLLTLGMMMMSPVIISTPIKLILFVAMDGWTMLSKGLILQYFDLSINP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| epaP | AAZ31293.1 | EpaP | Virulence | ETT2 | Protein | 3e-64 | 100 |
| spaP | NP_311752.1 | surface presentation of antigens protein SpaP | Not tested | LIM | Protein | 8e-63 | 99 |
| spaP | YP_217809.1 | surface presentation of antigens protein SpaP | Virulence | SPI-1 | Protein | 7e-45 | 66 |
| spaP | NP_461811.1 | surface presentation of antigens protein SpaP | Virulence | SPI-1 | Protein | 7e-45 | 66 |
| spaP | NP_806493.1 | surface presentation of antigens protein SpaP | Virulence | SPI-1 | Protein | 2e-44 | 65 |
| spaP | NP_457284.1 | secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 2e-44 | 65 |
| spaP | AAS66865.1 | SpaP | Not tested | SSR-2 | Protein | 2e-44 | 57 |
| ysaR | AAS66846.1 | YsaR | Not tested | SSR-1 | Protein | 6e-38 | 56 |
| escR | AAC31528.1 | L0049 | Virulence | LEE | Protein | 6e-25 | 43 |
| escR | ACU09473.1 | type III secretion system protein EscR | Virulence | LEE | Protein | 6e-25 | 43 |
| ECs4583 | NP_312610.1 | type III secretion system protein | Virulence | LEE | Protein | 8e-25 | 43 |
| escR | AAK26700.1 | EscR | Virulence | LEE | Protein | 5e-25 | 43 |
| escR | YP_003236103.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 8e-25 | 43 |
| escR | AAL57527.1 | EscR | Virulence | LEE | Protein | 5e-25 | 43 |
| escR | NP_290283.1 | type III secretion system protein | Virulence | LEE | Protein | 8e-25 | 43 |
| escR | CAC81847.1 | EscR protein | Virulence | LEE II | Protein | 5e-25 | 43 |
| escR | YP_003223490.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 7e-25 | 43 |
| escR | CAI43889.1 | EscR protein | Virulence | LEE | Protein | 5e-25 | 43 |
| escR | YP_003232138.1 | type III secretion system protein | Virulence | LEE | Protein | 7e-25 | 43 |
| escR | AAC38369.1 | EscR | Virulence | LEE | Protein | 3e-24 | 43 |
| lscR | AAO18040.1 | LscR | Virulence | TTSS locus | Protein | 2e-24 | 42 |
| escR | AFO66317.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 5e-22 | 41 |
| escR | AFO66400.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 5e-22 | 41 |
| unnamed | AAL06354.1 | EscR | Virulence | LEE | Protein | 2e-23 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| spaP | YP_006768713.1 | type III secretion system protein SpaP | VFG0551 | Protein | 3e-45 | 66 |
| spaP | YP_006768713.1 | type III secretion system protein SpaP | VFG2455 | Protein | 1e-43 | 61 |
| spaP | YP_006768713.1 | type III secretion system protein SpaP | VFG1773 | Protein | 2e-44 | 60 |
| spaP | YP_006768713.1 | type III secretion system protein SpaP | VFG1012 | Protein | 2e-39 | 58 |
| spaP | YP_006768713.1 | type III secretion system protein SpaP | VFG0394 | Protein | 7e-26 | 45 |
| spaP | YP_006768713.1 | type III secretion system protein SpaP | VFG0188 | Protein | 7e-25 | 44 |
| spaP | YP_006768713.1 | type III secretion system protein SpaP | VFG0827 | Protein | 3e-25 | 43 |
| spaP | YP_006768713.1 | type III secretion system protein SpaP | VFG0715 | Protein | 1e-24 | 43 |
| spaP | YP_006768713.1 | type III secretion system protein SpaP | VFG0044 | Protein | 4e-24 | 41 |
