Gene Information

Name : arsB (LFML04_1002)
Accession : YP_006766193.1
Strain : Leptospirillum ferriphilum ML-04
Genome accession: NC_018649
Putative virulence/resistance : Resistance
Product : ArsB,arsenical pump membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 945206 - 946525 bp
Length : 1320 bp
Strand : -
Note : -

DNA sequence : 
ATGCTGGCCGCCATTGTTTTTATCCTCACACTCATGCTGGTTATCCTCCAGCCACGGGGGCTCGGAATCGGCTGGAGTGC
CCTGATCGGGGCAGCCGCCGATCTTGCTCTGGGCGTTGTGCACTGGAAAGACGTCCCCGTTGTGTGGAGCATTATTTGGG
ATGCCACGTTTACATTCGTGGCCCTGATCATCCTCTCCCTGCTCCTGGACGAAGCCGGTTTTTTTCACTGGGCGGCACTT
CACATGGGCCGACTGGGACAGGGACGTCCTTCGCGTCTTTTTTTCCTCGTGATTCTCCTCGGAATGGGGGTTTCTGCCGT
CTTCGCAAACGATGGTGCGGCACTGATTCTGACACCGATCGTCCTGGCGATGCTCCTCTCCCTGGGGTTGACCCCGTCCG
GGGCACTGGCGTTCGTCATTGCCACCGGGTTTGTCGCCGACACAACCTCTCTCCCATTCATCATCTCAAACCTTGTGAAC
ATCGTTTCGGCTGACTTTTTTCACATCTCTTTCGTCCGCTACTCCCAGGTGATGGTGCCAGTGGACATTCTCTCGGGAGT
TTCAACCCTGCTGGTTCTCTGGCTTTACTACAGGCGCCACCTTCCGGAATCCTATAATTTGTCTCTCCTGGAATCCCCCC
GGCACGCTATCCGGGATCCGGTCGTCTTCCGATGGGGATTTGCCCTCCTCTTCCTTCTCCTGATCGTCTATTTCGTGAGT
GCACCTCTTGGAATCCCGGTCTCTCTTGTGACCTCATCGGCAGCCATCCTCCTCCTCCTGATCGCGGCCCGCGCATACAC
CGGGGGAAAAGGGCGGCTCATTCCCATCATCCCTGTTTTGAAGGGCGCCCCCTGGCAAATCGTCCTCTTCAGCATGGGGA
TGTACCTGGTCGTCTATGGCCTGAAAAACGCCAACCTGACGGCTTTTCTCTCAACTCTTCTCGCAGACCTTGCCTCCCAT
GGTCTCTGGGTCGCGACTATCGGCACCGGATTCCTGTCTGCTCTCCTGTCCTCCGTCATGAACAACCTGCCATCGGTTCT
GATCGGGGCCTTGTCCATCCAGGGAGCCGGCTCCTTTCCGGACGGCATTCGCGAATCCATGATCTATGCGAATGTCATCG
GGTGTGATCTGGGCCCGAAGTTTACCCCCATTGGAAGCCTGGCCACTCTTCTCTGGCTGCATGTTCTGGAAAAGAAGGGA
GAACATATCGGGTGGGGTCTCTATATGCGCGTGGGAATTGTCCTCACCGTCCCGGTCCTTCTTGCAACCCTTGCGGGTCT
GGCCGGCTGGATCGGCTTTCTGGGCCACATCCGTCACTGA

Protein sequence : 
MLAAIVFILTLMLVILQPRGLGIGWSALIGAAADLALGVVHWKDVPVVWSIIWDATFTFVALIILSLLLDEAGFFHWAAL
HMGRLGQGRPSRLFFLVILLGMGVSAVFANDGAALILTPIVLAMLLSLGLTPSGALAFVIATGFVADTTSLPFIISNLVN
IVSADFFHISFVRYSQVMVPVDILSGVSTLLVLWLYYRRHLPESYNLSLLESPRHAIRDPVVFRWGFALLFLLLIVYFVS
APLGIPVSLVTSSAAILLLLIAARAYTGGKGRLIPIIPVLKGAPWQIVLFSMGMYLVVYGLKNANLTAFLSTLLADLASH
GLWVATIGTGFLSALLSSVMNNLPSVLIGALSIQGAGSFPDGIRESMIYANVIGCDLGPKFTPIGSLATLLWLHVLEKKG
EHIGWGLYMRVGIVLTVPVLLATLAGLAGWIGFLGHIRH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 6e-111 61
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 6e-91 52
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 2e-89 51
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 3e-90 51

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
arsB YP_006766193.1 ArsB,arsenical pump membrane protein BAC0578 Protein 5e-110 61
arsB YP_006766193.1 ArsB,arsenical pump membrane protein BAC0031 Protein 2e-107 61
arsB YP_006766193.1 ArsB,arsenical pump membrane protein BAC0576 Protein 4e-110 60
arsB YP_006766193.1 ArsB,arsenical pump membrane protein BAC0577 Protein 4e-107 60
arsB YP_006766193.1 ArsB,arsenical pump membrane protein BAC0574 Protein 3e-89 51
arsB YP_006766193.1 ArsB,arsenical pump membrane protein BAC0575 Protein 3e-91 51