Gene Information

Name : LFML04_0810 (LFML04_0810)
Accession : YP_006766004.1
Strain : Leptospirillum ferriphilum ML-04
Genome accession: NC_018649
Putative virulence/resistance : Virulence
Product : UDP-glucose 4-epimerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 750583 - 751533 bp
Length : 951 bp
Strand : +
Note : -

DNA sequence : 
ATGCGGTATCTTGTCACGGGTGGAGCGGGATTCATCGGTTCCCACCTGGTCCGGGCCCTTCTTGAAAATGGACACGAAGT
GCGGGTCCTGGACAATTTTTCGACCGGGAAAGAGGAAAATCTGGCCGAGCTGTCCGGGCGTATCGACGTGATCCGGGGAG
ATGTCCGGAGTTTCGCGGATATCGAAAAAGCGCTGGAGGGCGTGACGTTTGTGTTTCATCAGGCCGCGGTGGGCTCCGTC
CCGCGTTCGATTGCGGATCCCTTTGATACCCAGACGGCGAATGTAAACGGGACGCTCAATCTCTTATGGAAGGCGAAGGA
GTTTGGGGTGCAGAGGGTCGTGATTGCGGGGTCTTCGTCTGTTTACGGAGACACGCCGGGAATGCCCCGCGTCGAGACGC
TCCTGCCCTCTCCCCTTTCTCCGTATGCCTTGAGCAAGCTTTCCCAGGAGCTGTTCGGGAAGATCTTTTCCAAGACCTTT
GGGCTTGACACGGTCACGCTTCGATACTTCAACATTTTTGGTCCCCGTCAGGATCCCCGTTCGGAATATGCGGCGGTCAT
TCCGCGTTTTGTCCGGGCGATCCTGAAAAAAGACGCTGTGACCATCAACGGGACCGGGGAGCAGTCGCGGGATTTTACAT
TCATCGACAATGTGGTGCAGGCGAATCTTCTGGCAATGGAAACGACGCGGGGCATTGGAGAGGCGTTCAATATCGGATGC
GGCTCCAGTTTCAGTATCCTCGAGCTGGTCGACCACCTTTCCGACATTCTCGGCGTTCGTCCGGAAGTCCGGCACTTGCC
GCCCAGGGCCGGAGATCCGATGGCGTCCCAGGCAGATATCTCGAAAGCGCGGGATCTTCTGGGCTACAGTCCCAAGGTCT
ATTTCCGGGAAGGGCTCGAGCGAACAGCCCGGTGGTTCGAAGAGAAGTTTCGACGAACGGGAGACCTATGA

Protein sequence : 
MRYLVTGGAGFIGSHLVRALLENGHEVRVLDNFSTGKEENLAELSGRIDVIRGDVRSFADIEKALEGVTFVFHQAAVGSV
PRSIADPFDTQTANVNGTLNLLWKAKEFGVQRVVIAGSSSVYGDTPGMPRVETLLPSPLSPYALSKLSQELFGKIFSKTF
GLDTVTLRYFNIFGPRQDPRSEYAAVIPRFVRAILKKDAVTINGTGEQSRDFTFIDNVVQANLLAMETTRGIGEAFNIGC
GSSFSILELVDHLSDILGVRPEVRHLPPRAGDPMASQADISKARDLLGYSPKVYFREGLERTARWFEEKFRRTGDL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 1e-50 43
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 1e-50 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LFML04_0810 YP_006766004.1 UDP-glucose 4-epimerase VFG0430 Protein 5e-51 43