Gene Information

Name : LFML04_0607 (LFML04_0607)
Accession : YP_006765803.1
Strain : Leptospirillum ferriphilum ML-04
Genome accession: NC_018649
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 546188 - 547207 bp
Length : 1020 bp
Strand : -
Note : -

DNA sequence :
ATGGCGACATTCCGCAAGCGTTCCGGTTCCTGGCAGGTCCTTGTCCGAAAAAAAGGTTTCGGACAGATCGGACGGACGTT
TGACACGAAGTCCGAGGCGGAAACCTGGGCCAAGATCGTCGAGTCGGAAATGGTCCGTGGCGTCTTTGTCACCCGAAATG
AAGCCGAAAACACGACCCTCTCCGAGGCTCTGGACCGCTACGAACGGGAGAAAAATAAGAAAGGGGTCCAACAATACACG
TCCCTGGTCAACGTCTGGAAGCGCCATCCTCTTTCAAAGAGATTTCTCACAACGATCCAGGGGAAAGACATTGCCGAATA
TAGGGACAACCGGCTTGAAACGGTCGGGGCTCAAACGGTCCTTCACGAAATCGGCCTTCTTTCCCGCCTTTACAATACGG
CGATCAAGGAATGGGGAATGGGGGGACTTCTTAATCCTGTCGTTCAGATAAGAAAACCCAAGATGCCAAAAGCCAGGGAT
CGTCGTCTGAAACATGGAGAGCCGGAGAGGATATGCGGAGCCTCGAAATCGGAAATCCTCACCTCCATCGTCTGGTTTGC
CGTTGAAACTGGGATGAGACAAGCGGAAATCGCCGGGATGACCTGGGACCTGGTGGACCTCAAGAAGCGGACAGTGACGC
TTCCGGACACGAAGAACGGGGAAAAGCGGATTGTCCCTCTCTCGACGGAAGCTCTTCGGATCCTGTCGGACCTCCCCCGC
CGGCTCGACGGGAAGGTCTGGGGAATGGAACCCCATTCGATTTCTCAAGCGTTTCGCAAGGCTGTTTCCCGCGCCCGAAA
AGCCTATGAGCAGGAATGCGAGGAAAAGGGTCAGAAGCCGGATCCGTCCTACCTGGCGGACCTCACCTTCCACGACCTCC
GGCACGAAGCGACCAGCCGGTTCTTCGAGAAGGGCCTGAACCCCATGCAGGTGGCGGCCATCACCGGGCACAAGACGTTG
CAGATGCTCAAACGCTATACCCACCTGAAGGCGGAAGATTTGGCGGAGTTGTTGAGGTGA

Protein sequence :
MATFRKRSGSWQVLVRKKGFGQIGRTFDTKSEAETWAKIVESEMVRGVFVTRNEAENTTLSEALDRYEREKNKKGVQQYT
SLVNVWKRHPLSKRFLTTIQGKDIAEYRDNRLETVGAQTVLHEIGLLSRLYNTAIKEWGMGGLLNPVVQIRKPKMPKARD
RRLKHGEPERICGASKSEILTSIVWFAVETGMRQAEIAGMTWDLVDLKKRTVTLPDTKNGEKRIVPLSTEALRILSDLPR
RLDGKVWGMEPHSISQAFRKAVSRARKAYEQECEEKGQKPDPSYLADLTFHDLRHEATSRFFEKGLNPMQVAAITGHKTL
QMLKRYTHLKAEDLAELLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13530.1 site-specific recombinase Not tested PAGI-8 Protein 2e-48 42
rci NP_458640.1 shufflon-specific DNA recombinase Not tested SPI-7 Protein 5e-36 42
rci NP_807850.1 shufflon-specific DNA recombinase Not tested SPI-7 Protein 5e-36 42
rci AAC38070.2 Rci Not tested SPI-7 Protein 4e-36 42