Gene Information

Name : LFML04_0505 (LFML04_0505)
Accession : YP_006765702.1
Strain : Leptospirillum ferriphilum ML-04
Genome accession: NC_018649
Putative virulence/resistance : Unknown
Product : transposase, IS21 family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 458901 - 460457 bp
Length : 1557 bp
Strand : +
Note : -

DNA sequence :
ATGCAGCATGCCCGAGAGATCTTACGGCTGTCCCGCGAAAAAGGAATGACGGGACGGGCCATTGCGCAAAGCCTGTCACT
CTCTCCCACAACCGTTACCAAGTATCTCAAGCAACTTGAGCCGGTTCCCTGGCCCTTGCCCGAACCGGGTGGGGAAGCGC
TCCTGTCTCAGGTCCTGGAGAAGAAGAAATCTTCCGCGCCGTCTGCCCGGGTCGAACCGGACTGGGATCAGGTCCATCGG
GAGCTTCAGAGCCACAAGGGCGTCACCCTCCTGCTCCTCTGGGAAGAGTACCGGGAGACAACAAAGGAGCGGGGATATTC
CTATTCCCGCTTCTGCCTGCATTATGCTGCCTATGCCAAGCGCCTGAAGCCCTCCTACCGGAACACCTACACCCCGGGGG
ACCGGCTCTTCATCGACTATGCTGGGAGCACCGTCCCGATCCGGGATCCAAAAACAGGAGAATGGGCGCTCGAAGCTCAG
ATCTTCGTTGCCGTCCTGGGGTTCTCGAACTACGTCTTTGCCGAAGCGACATCGAGTCAGGACCTCTCCTGCTGGATCGG
CTCCCATGTCCGCTGCTTTGCGTTCCTGGGCGGGGTTCCCGCCCTCCTGGTTCCGGACAATCTTAAAAGCGGGATCACCA
CTCCCGATCTCTACGAGCCCCTCGCCAACGAGACCTACCGGGAGATGGCGGAGCATTACTCCGTGGCCATCTTCCCGGCG
CGCGTCAGACGTCCCAAGGATAAGGCTCCCGGAGAACAGGCGGTCCAACTGGTAACCCGCTGGATCCTGGCCAAACTGAG
AAAGCGCACCTTCTTCGATCTGGCCGAGCTGAACCGGGCGATCCGGCTCCTGCTTGCGGAGCTCAACACACGCCCCTTCA
AGAACGGTCGCCCCGGATCGAGACAGGACCTCTTCCTCTCCCAGGAGAAGACGGCTCTCGGTCCTCTTCCAACATCCCGC
TACGAGCTGGCCCGGTGGAAGAAGGCCAAGGTTCATATCGACTATCACGTCGAGGTGGACCGGCACTTCTACTCCGTCCC
CCACGCCCTGATCCACCAGGAGGTCCGGATCCGCATCACCGAGTCCGTCGTGGAGGTCTTCCACAGCGGCGCCCGCGTGG
CCAGCCATCGAAAGGATCCCGCTCCCGGCCGTCACAGCACACTGTCCGCCCACATGCCCGAGTCCCACCTGGCCGTGAGT
GGCTGGAGTCCGGAACGCTTCCTCGAGTGGGCCGGCCGGGTCGGGAAGGCCACCCAACAGGTGGTGGAGGTCCTCCTCTC
CTCCCGCCGTCATCCCCAGCAGGCCTATCGGAGCTGTCTGGGACTCCTGTCCCTGGCCAGGAAAGACTCTCCCTCGACCC
TCGAGCAGGCCTGCCAGAGGGCTCTCTCCCTGGGGGTCTGTTCCTACCGGGAGGTCCGGGTGCTCATGGAGTCGGCCTCC
TCCCGAAAGACGTCCTCCGAGGCTCCGAACTCCCCTCCTGTTCCCACCCACGACAACATCCGGGGAGCGCGTTATTACGC
GGCCCTCGATAACACAAAAGGAGATCCCCCATGCTGA

Protein sequence :
MQHAREILRLSREKGMTGRAIAQSLSLSPTTVTKYLKQLEPVPWPLPEPGGEALLSQVLEKKKSSAPSARVEPDWDQVHR
ELQSHKGVTLLLLWEEYRETTKERGYSYSRFCLHYAAYAKRLKPSYRNTYTPGDRLFIDYAGSTVPIRDPKTGEWALEAQ
IFVAVLGFSNYVFAEATSSQDLSCWIGSHVRCFAFLGGVPALLVPDNLKSGITTPDLYEPLANETYREMAEHYSVAIFPA
RVRRPKDKAPGEQAVQLVTRWILAKLRKRTFFDLAELNRAIRLLLAELNTRPFKNGRPGSRQDLFLSQEKTALGPLPTSR
YELARWKKAKVHIDYHVEVDRHFYSVPHALIHQEVRIRITESVVEVFHSGARVASHRKDPAPGRHSTLSAHMPESHLAVS
GWSPERFLEWAGRVGKATQQVVEVLLSSRRHPQQAYRSCLGLLSLARKDSPSTLEQACQRALSLGVCSYREVRVLMESAS
SRKTSSEAPNSPPVPTHDNIRGARYYAALDNTKGDPPC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF_6 AAZ04417.1 putative transposase subunit Not tested PAI I APEC-O1 Protein 8e-100 45
APECO1_3528 YP_854247.1 transposase for ISEc12 Not tested PAI I APEC-O1 Protein 1e-99 45
unnamed CAC39294.1 hypothetical protein Not tested LPA Protein 2e-99 44
VPI2_0005c ACA01822.1 IstA Not tested VPI-2 Protein 1e-97 43