Gene Information

Name : fliP (LFML04_0239)
Accession : YP_006765444.1
Strain : Leptospirillum ferriphilum ML-04
Genome accession: NC_018649
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 226659 - 227456 bp
Length : 798 bp
Strand : +
Note : -

DNA sequence :
GTGGAGCGTCTGAGACGCGTTTTTCCTGTCGTCGTTTTTCTGACGGTCTTCTGGATGACGGGGGTTCTTTTTGTCACCTC
CGCGCCGGCGGCGGATCTTCATGTCGCGCCCGTCTCCCCCCTTCCGGATATCCATCTGTCGTTCGGGTCCGGCACGCCGG
CTCCCAGCCAGGTTGCCGTGACGGTTGAGCTTTTGCTCCTTCTGACCGTCCTTTCCCTGGCACCGGCCATTCTGGTCATG
ATGACCTCCTTCACGCGGATCGTGGTGGTCCTGTCGTTCCTCCGCCAGGCCATGGGAACGGCCCAGGTTCCCCCCAACCA
GGTTCTTGTCGGGCTGTCCCTTTTTTTGACGTTCTTTGTCATGGCTCCGGTCTGGAAAACGATGGACGAAACAGCGATCA
CTCCCTATCTGGACAAGAAGATCGCTCCGGACGTCGCCGTGGACCGGGCCATGAAGCCGGTCCGGGCGTTCATGTTCCGG
CAGGTCCGTCAAAAAGACATCGCTCTTTTTGTCCGCATCGCGCATCTTCCCCGCACGCCGTCCTCTCCGGACGACATTCC
GACGTATGTTCTGATTCCGGCGTTTGTCGTCAGCGAACTGTCGACCGCCTTCGAGATGGGCTTTCTGATTTATCTTCCGT
TTTTGATCCTCGACATGGTGGTTTCGTCGGTCCTGATGTCCATGGGGATGATGATGCTCCCGCCGACGGTCGTTTCTCTT
CCGTTTAAAATCCTGCTGTTTGTTCTGGTGGATGGCTGGTCCCTGGTTGTGGGCTCCCTGGTCCGGAGTTTCCACTAG

Protein sequence :
MERLRRVFPVVVFLTVFWMTGVLFVTSAPAADLHVAPVSPLPDIHLSFGSGTPAPSQVAVTVELLLLLTVLSLAPAILVM
MTSFTRIVVVLSFLRQAMGTAQVPPNQVLVGLSLFLTFFVMAPVWKTMDETAITPYLDKKIAPDVAVDRAMKPVRAFMFR
QVRQKDIALFVRIAHLPRTPSSPDDIPTYVLIPAFVVSELSTAFEMGFLIYLPFLILDMVVSSVLMSMGMMMLPPTVVSL
PFKILLFVLVDGWSLVVGSLVRSFH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 2e-26 44
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 2e-26 44
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 1e-26 42
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 4e-23 42
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 2e-26 42
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 2e-26 42
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 2e-26 42
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 2e-25 41
hrcR YP_198720.1 type III secretion system protein Virulence Hrp PAI Protein 2e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_006765444.1 flagellar biosynthesis protein FliP VFG2016 Protein 8e-47 59
fliP YP_006765444.1 flagellar biosynthesis protein FliP VFG2494 Protein 2e-43 58
fliP YP_006765444.1 flagellar biosynthesis protein FliP VFG1259 Protein 8e-44 57
fliP YP_006765444.1 flagellar biosynthesis protein FliP VFG2338 Protein 3e-45 55
fliP YP_006765444.1 flagellar biosynthesis protein FliP VFG0044 Protein 1e-26 42
fliP YP_006765444.1 flagellar biosynthesis protein FliP VFG0188 Protein 5e-26 41
fliP YP_006765444.1 flagellar biosynthesis protein FliP VFG0394 Protein 1e-24 41