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Name : LFML04_0230 (LFML04_0230) Accession : YP_006765435.1 Strain : Leptospirillum ferriphilum ML-04 Genome accession: NC_018649 Putative virulence/resistance : Virulence Product : flagellum-specific ATP synthase FliI Function : - COG functional category : - COG ID : - EC number : - Position : 218970 - 220358 bp Length : 1389 bp Strand : + Note : - DNA sequence : ATGAGCGCACTCGAGGAGGTGCGCTCCCGTCTCGAAAGCGTGCTTGTCCGGAAGCTGTCCGTTCTCGGATCCGCCGTCAG GCAGTGGGAACCGTTTTCCCGGGAGGGTGCCGTCGTGGAGGGAATCGGACTGATGATCGAAGCCCGCGGCATCGAGCTCG GGATCGGGGAGATCTGCTCGATCGGCTCGGATCCTCCCGTGGCCGCAGAAGTGGTCGGATTCCGCGAAGGCCGCTCCCTT CTGATGCCTTTGGGCGAACTCCGGGGCATTCGCCCGGGACTGTCCGTGGCCTGCCGGGAAAAGCGCCCTCAAGCGTGGGT GTCGGAGCAGTTTCTGGGACGCGTTCTCGATCCGATGGGCCATGCCCTGGACGGAGGAGCCGATCCCGAAGGTGCGGTGC CCGTTCCCCTTTACGGAGAACCCGTGAACCCCCTCGTCCGCCGGCGGGTCGATTCCGTTCTGGACACCCGTGTCCGGGCG CTCAATGCGTTATTGACCCTGGGCCAGGGACAGAAAGTGGGCCTGTTTGCCGGAGCCGGTGTCGGAAAGAGCACCCTCCT GGGGATGATGGCCAGGGAAGCCGATGTGGATGTCAGCGTCGTGGCCCTGATCGGCGAGCGGGGACGGGAAGTCCGGGAGT TTCTGGAGCGGGATCTCGGGGAGGAAGGATTGTCCCGTTCGGTGGTCGTTGTCTCGACCGGCGACCAGCCCTCCCTCCTT CGGGTCCGGGGGGCGCTGTTTGCGATGAGTGTCGCGGAATATTTCCGGAAACAGAACCGGAGCGTTCTCTTTGTCATGGA TTCTCTGACGCGTTTCGCGATGGCCCTTCGGGAGATCGGCCTCGCGACAGGAGAACCTCCGACAGCCCGGGGATATACTC CTTCCGTGTTTGCCCAGCTTCCCCGATTCGTCGAAAGGGCCGGAGGGATCGAAGGAGAAGGCAGCATCACCGGTCTCTAT ACCGTTCTCGTCGAAGGGGCCGACATGACATCGGATCCCTTGTCCGATGCGCTGGCCGCCATCCTGGACGGTCATATTCT TCTGTCCCGGGATCTGGCGGCGGAAGGGATCTATCCCTCGGTGGACCTCCTGCACAGCCGCTCCAGGGTGATGCCGGTGA TTGCCGATCCGCACCATCGGGCCCTGGCCGCGACCTTCCTCCGGTATGAAAGTCTGTACCGGAAATCGGAAGACCTGATC CGGGTCGGTGCCTATGTTCCGGGGATGGACCCGGAACTCGACCAGGCGGTTTCCCTTCATCCGAGGATGATGGAATTTTT GTCCCAGCCCGCCGGGGAGGGGATTTCCTTCACCGACAGTCTTGCGGCCCTGGAAGAGGTTCTCGAAGGCGAGGATGTGC GGGTCGGTTCCGGAGAAGGAGAACTCTGA Protein sequence : MSALEEVRSRLESVLVRKLSVLGSAVRQWEPFSREGAVVEGIGLMIEARGIELGIGEICSIGSDPPVAAEVVGFREGRSL LMPLGELRGIRPGLSVACREKRPQAWVSEQFLGRVLDPMGHALDGGADPEGAVPVPLYGEPVNPLVRRRVDSVLDTRVRA LNALLTLGQGQKVGLFAGAGVGKSTLLGMMAREADVDVSVVALIGERGREVREFLERDLGEEGLSRSVVVVSTGDQPSLL RVRGALFAMSVAEYFRKQNRSVLFVMDSLTRFAMALREIGLATGEPPTARGYTPSVFAQLPRFVERAGGIEGEGSITGLY TVLVEGADMTSDPLSDALAAILDGHILLSRDLAAEGIYPSVDLLHSRSRVMPVIADPHHRALAATFLRYESLYRKSEDLI RVGAYVPGMDPELDQAVSLHPRMMEFLSQPAGEGISFTDSLAALEEVLEGEDVRVGSGEGEL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lscN | AAO18044.1 | LscN | Virulence | TTSS locus | Protein | 4e-82 | 48 |
| hrcN | YP_198730.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 1e-79 | 45 |
| hrpB6 | BAB07852.1 | HrpB6 | Virulence | Hrp PAI | Protein | 1e-79 | 45 |
| hrpB6 | AAF61281.1 | HrpB6 | Virulence | Hrp PAI | Protein | 1e-79 | 45 |
| XC_3006 | YP_244074.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 4e-78 | 45 |
| hrcN | NP_636610.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 4e-78 | 45 |
| hrcN | NP_640767.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 3e-78 | 45 |
| hrcN | AAT96339.1 | HrcN | Virulence | S-PAI | Protein | 8e-66 | 45 |
| hrcN | AAT96258.1 | HrcN | Virulence | S-PAI | Protein | 4e-66 | 45 |
| hrcN | AAT96299.1 | HrcN | Virulence | S-PAI | Protein | 3e-66 | 45 |
| hrpB6 | AAB08461.1 | HrpB6 | Virulence | Hrp PAI | Protein | 2e-78 | 44 |
| hrcN | AAP34339.1 | HrcN | Virulence | Hrp PAI | Protein | 1e-78 | 44 |
| hrcN | YP_362163.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 3e-78 | 44 |
| hrcN | AAB06001.1 | HrcN | Virulence | Hrp PAI | Protein | 2e-65 | 44 |
| ssaN | YP_216423.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 1e-72 | 44 |
| ssaN | NP_456113.1 | putative type III secretion ATP synthase | Virulence | SPI-2 | Protein | 6e-73 | 44 |
| ssaN | NP_805086.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 6e-73 | 44 |
| ssaN | NP_460380.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 2e-73 | 44 |
| ssaN | CAA70537.1 | secretion system apparatus | Virulence | SPI-2 | Protein | 2e-73 | 44 |
| hrcN | ABA47275.1 | HrcN | Virulence | S-PAI | Protein | 9e-70 | 44 |
| YPO0267 | YP_002345348.1 | type III secretion system ATPase | Virulence | Not named | Protein | 2e-68 | 43 |
| hrcN | AAG33879.1 | HrcN | Virulence | Hrp PAI | Protein | 1e-60 | 41 |
| hrcN | AAT96141.1 | HrcN | Virulence | T-PAI | Protein | 1e-61 | 41 |
| hrcN | AAT96195.1 | HrcN | Virulence | T-PAI | Protein | 1e-61 | 41 |
| hrcN | AAR25633.1 | type III secretion cytoplasmic ATPase HrcN | Not tested | Not named | Protein | 7e-57 | 41 |
| unnamed | AAL06369.1 | EscN | Virulence | LEE | Protein | 9e-68 | 41 |
| hrcN | ABQ88354.1 | HrcN | Virulence | Hrp PAI | Protein | 4e-56 | 41 |
| hrpJ4 | AAA81942.1 | HrpJ4 | Virulence | Hrp PAI | Protein | 4e-56 | 41 |
| hrcN | NP_791227.1 | type III secretion cytoplasmic ATPase HrcN | Virulence | Hrp PAI | Protein | 2e-60 | 41 |
| escN | AFO66300.1 | putative LEE-encoded type III secretion system ATPase | Virulence | SESS LEE | Protein | 7e-66 | 41 |
| escN | AFO66415.1 | putative LEE-encoded type III secretion system ATPase | Virulence | SESS LEE | Protein | 7e-66 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LFML04_0230 | YP_006765435.1 | flagellum-specific ATP synthase FliI | VFG2331 | Protein | 6e-84 | 49 |
| LFML04_0230 | YP_006765435.1 | flagellum-specific ATP synthase FliI | VFG0192 | Protein | 1e-83 | 49 |
| LFML04_0230 | YP_006765435.1 | flagellum-specific ATP synthase FliI | VFG1254 | Protein | 2e-85 | 49 |
| LFML04_0230 | YP_006765435.1 | flagellum-specific ATP synthase FliI | VFG0390 | Protein | 6e-84 | 48 |
| LFML04_0230 | YP_006765435.1 | flagellum-specific ATP synthase FliI | VFG2499 | Protein | 2e-86 | 47 |
| LFML04_0230 | YP_006765435.1 | flagellum-specific ATP synthase FliI | VFG0048 | Protein | 1e-83 | 46 |
| LFML04_0230 | YP_006765435.1 | flagellum-specific ATP synthase FliI | VFG2144 | Protein | 7e-83 | 44 |
| LFML04_0230 | YP_006765435.1 | flagellum-specific ATP synthase FliI | VFG0515 | Protein | 9e-74 | 44 |
| LFML04_0230 | YP_006765435.1 | flagellum-specific ATP synthase FliI | VFG2459 | Protein | 2e-62 | 42 |
| LFML04_0230 | YP_006765435.1 | flagellum-specific ATP synthase FliI | VFG1778 | Protein | 6e-58 | 41 |
