Gene Information

Name : LFML04_2190 (LFML04_2190)
Accession : YP_006767342.1
Strain : Leptospirillum ferriphilum ML-04
Genome accession: NC_018649
Putative virulence/resistance : Unknown
Product : IS21 family transposition helper protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2072862 - 2073629 bp
Length : 768 bp
Strand : -
Note : -

DNA sequence :
ATGCACTTCGAATATCTTCCGGACCGCCTGGACGGGATCCTGGAGGAGGCCGGGAAGCGGGACCTCGATGACCAAAGCAT
TTTGTCGGAAGAGCTCAAGATCGAATGGGAGGGTCGCTACCAGAAAGGGGTCTCCTTTCGCCTCGCCCTGTCCCGCTTCC
CGGTGGTGAAGACGCTGGAGACCTTCGATCTGTCCTTCCAGCCCTCGATTGCGCCCCGGACGATCCGGGAACTGTCCGGT
CTGTCCTTCATTGATCGAGCCGAAAACGTGATCTTCCTCGGCCCTTCAGGAGTGGGAAAAACGCATCGCGCGATCTCCCT
GGGAGTCAAAGCCGTGGAAGCGGGCTATCGGGTGCTGTTCCTCTCCTTCGAGGACTTCCTGGGAAAGCTCCGGAAGGCCC
ATGTGGAAAAGAAGCTGGAAAAAACCTTGACGGTGCTGACACTCCCCAAGCTCCTGATTTTGGATGAGATCGGGTACCTG
CCCCTCTCCCGGGACGAAGCGAGTCTGTTCTTCCGGCTCCTCTGCCGACGCTACGAGAAGGCCAGCCTCATCCTGACCTC
GAACAAGAGTTTTCTGGACTGGGGGGAGGTCTTTGGGGATCAGACCCTGGCCACGGCGATTCTGAACCGACTGCTCCATT
ATGCCACGACGGTCAACATCAAGGGGGAGTCCTTCCGTCTCAAGGAACGACGACGGTCCGGCCTCATGGAATCCAAAACC
CCTGTCACCAAGGAGGACCCTCCCAAAGACGACGAAACGTCGGAGTAA

Protein sequence :
MHFEYLPDRLDGILEEAGKRDLDDQSILSEELKIEWEGRYQKGVSFRLALSRFPVVKTLETFDLSFQPSIAPRTIRELSG
LSFIDRAENVIFLGPSGVGKTHRAISLGVKAVEAGYRVLFLSFEDFLGKLRKAHVEKKLEKTLTVLTLPKLLILDEIGYL
PLSRDEASLFFRLLCRRYEKASLILTSNKSFLDWGEVFGDQTLATAILNRLLHYATTVNIKGESFRLKERRRSGLMESKT
PVTKEDPPKDDETSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api84 CAF28558.1 putative transposase Not tested YAPI Protein 1e-37 45
unnamed CAA21402.1 - Not tested HPI Protein 2e-37 45
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 1e-37 45
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 1e-37 45
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 1e-37 45
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 1e-37 45
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 1e-37 45
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 2e-37 45
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 1e-37 45
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 2e-37 45
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 2e-37 45
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 2e-33 44
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 1e-36 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LFML04_2190 YP_006767342.1 IS21 family transposition helper protein VFG1606 Protein 7e-38 45
LFML04_2190 YP_006767342.1 IS21 family transposition helper protein VFG1515 Protein 7e-38 45
LFML04_2190 YP_006767342.1 IS21 family transposition helper protein VFG1627 Protein 7e-38 45
LFML04_2190 YP_006767342.1 IS21 family transposition helper protein VFG1460 Protein 1e-33 44
LFML04_2190 YP_006767342.1 IS21 family transposition helper protein VFG1663 Protein 5e-37 44