Gene Information

Name : LFML04_1784 (LFML04_1784)
Accession : YP_006766944.1
Strain : Leptospirillum ferriphilum ML-04
Genome accession: NC_018649
Putative virulence/resistance : Unknown
Product : IstB-like ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1683108 - 1683896 bp
Length : 789 bp
Strand : +
Note : -

DNA sequence :
ATGCAGCTAGACTCCCTCCTCGAAAAACTGAAGATGGACCATCTGTCGTCGCGCCTGGACAGCGTATGCGAGCAGGCGTC
CAAACGGGATCTCGACTACAAGGGCTTCCTGGCCGAGGCCCTGTCCGCTGAATGGAGCGGACGGCACGGCAAGGGGGTGG
AGATGCGGCTGTCCCAGGCGCACTTCCCGGTGGTGAAGACGCTGGGGCAGTTCGACTTTGGCTTCCAGCCCTCCCTGGAC
AAAAAGGTTCTCCGGGAGCTGTCCGGGATGGGCTTTGTGGAACGCAGCGAGAACGTGATCTTTCTCGGACCGCCCGGGGT
GGGGAAAAGCCATCTGGCGATCGCTCTGGGGGTCAAGGCCGTGGAAGCGGGGTACCGGGTCCTGTTTCTGACCCTGGAGG
AGCTTCTGACCCGCCTCATGCGGGCCCAGTCCGAAAACCGGCTCGAGCGGATGCTCCAGCAGCTGGTCTACCCCCGCCTC
CTGATCCTGGACGAGATCGGGTATCTGCCGATGTCCCGGGAGGAAGCGAGTCTCTTCTTCCGGCTTCTCTGCCGGCGGTA
CGAGAAGGCGAGCCTCGTCCTGACCTCGAACAAGAGCTTCCTGGATTGGGGGGACATCTTTGGGGACCAGGTCCTGGCCA
CCGCCATTTTGGACCGGCTCCTGCACCATGCGACGACCGTCAATATCAAGGGCGAATCGTACCGGCTCAAGGAAAAAAGG
AGAGCGGGGCTTTTGGAATCCAGGACCGTTCCTCCGGAGGAACAGGAACCCCTTGAGGTTCCGACGTGA

Protein sequence :
MQLDSLLEKLKMDHLSSRLDSVCEQASKRDLDYKGFLAEALSAEWSGRHGKGVEMRLSQAHFPVVKTLGQFDFGFQPSLD
KKVLRELSGMGFVERSENVIFLGPPGVGKSHLAIALGVKAVEAGYRVLFLTLEELLTRLMRAQSENRLERMLQQLVYPRL
LILDEIGYLPMSREEASLFFRLLCRRYEKASLVLTSNKSFLDWGDIFGDQVLATAILDRLLHHATTVNIKGESYRLKEKR
RAGLLESRTVPPEEQEPLEVPT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 1e-38 49
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 2e-48 46
unnamed CAA21402.1 - Not tested HPI Protein 3e-48 46
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 2e-48 46
api84 CAF28558.1 putative transposase Not tested YAPI Protein 2e-48 46
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 2e-48 46
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 2e-48 46
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 2e-48 46
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 3e-48 46
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 3e-48 46
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 3e-48 46
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 4e-48 46
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 1e-47 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LFML04_1784 YP_006766944.1 IstB-like ATP-binding protein VFG1460 Protein 8e-39 49
LFML04_1784 YP_006766944.1 IstB-like ATP-binding protein VFG1627 Protein 1e-48 46
LFML04_1784 YP_006766944.1 IstB-like ATP-binding protein VFG1606 Protein 1e-48 46
LFML04_1784 YP_006766944.1 IstB-like ATP-binding protein VFG1515 Protein 1e-48 46
LFML04_1784 YP_006766944.1 IstB-like ATP-binding protein VFG1663 Protein 8e-48 45