Gene Information

Name : LFML04_1425 (LFML04_1425)
Accession : YP_006766603.1
Strain : Leptospirillum ferriphilum ML-04
Genome accession: NC_018649
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1350043 - 1350768 bp
Length : 726 bp
Strand : +
Note : -

DNA sequence : 
ATGATCGGGAACCCGTCCCGGGAGGAAGCACCGACTGTCGGCCTCGGGGTCCGGCTGGAAGGTGTCCGGAAATGGTATGG
GGAAAGAAGAAGAGAGGAGCGACCGGCCCTCCATATCCCCCAGCTTGAAATCCGGGGAGGGGAATGGGTTGTCCTGATGG
GGGATTCCGGTTCGGGGAAATCGACACTCCTGAACCTGGTCGGCGGTGTCGATCTGCCGGATGAGGGAACGATCCATCTC
GGAGAGGCTCCCCTGAATCGTCTTGCGGAACGGGAGAGAACCCTGTTTCGCCGGAAGAATATGGGCTTTGTTTTTCAGTT
CTTCAACCTGTTCCCCACACTTTCCGTGCGCGAAAACATCCTTCTTCCCCTGGGACTCCAGGGACGAAACGATCCTCTTG
CGGTGCGTCGTCTTCTGGAAGAGGTCGGTCTCTCCGGAATGGAGCACCGGGCCCCTTCGGAACTCTCCGGGGGAGAGCAG
CAGAGGGTTGCTCTGGCGCGGGCACTCGTCCATCGGCCCCGTCTCATCCTGGCGGATGAACCGACCGGTTCCCTCGACCA
CCGGACGGGGAACGTCGTTCTTTCCCTCCTGCAACGACTTCACCGGGAATACCGTCCGACGATCGTCATGTCCACCCACA
GTCAGGAAGCGGCCTCCTTTGGCGGCCGGGTCCTGCACATCCGGGACGGAGAAATCCTGGAGCCCCGGACACCGGCGACC
GCCTGA

Protein sequence : 
MIGNPSREEAPTVGLGVRLEGVRKWYGERRREERPALHIPQLEIRGGEWVVLMGDSGSGKSTLLNLVGGVDLPDEGTIHL
GEAPLNRLAERERTLFRRKNMGFVFQFFNLFPTLSVRENILLPLGLQGRNDPLAVRRLLEEVGLSGMEHRAPSELSGGEQ
QRVALARALVHRPRLILADEPTGSLDHRTGNVVLSLLQRLHREYRPTIVMSTHSQEAASFGGRVLHIRDGEILEPRTPAT
A

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 7e-31 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-33 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LFML04_1425 YP_006766603.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 9e-37 46
LFML04_1425 YP_006766603.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 5e-25 45
LFML04_1425 YP_006766603.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 4e-33 43
LFML04_1425 YP_006766603.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7685735. Protein 3e-36 43
LFML04_1425 YP_006766603.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 3e-38 42