Gene Information

Name : lolD (A964_1274)
Accession : YP_006764479.1
Strain : Streptococcus agalactiae GD201008-001
Genome accession: NC_018646
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1319755 - 1320465 bp
Length : 711 bp
Strand : -
Note : -

DNA sequence : 
GTGACAACTAATCGAAAAGAACTGATTAGATTGCATCAGATTGTTAAAAGTTATCAAAATGGGGATCAAAAACTTCAAGT
CTTAAAGAACATTGATTTGACGGTTTATGAAGGTGAATTTCTTGCAATCATGGGGCCATCTGGTTCGGGGAAATCCACAC
TAATGAATATTATTGGCTTGTTGGATTCCCCAACTTCAGGAGATTATAGTTTAAATGGTAAACGTGTCGAAGAACTAAGT
CAAACAAAATTAGCTCAAGTTCGAAATAAGGAAATCGGTTTTGTCTTTCAACAATTTTTCTTGTTATCTAAACTAACGGC
TTTGCAAAATGTTGAATTACCCTTAATTTATGCGGGTGTAGCTCCTAAAAAGCGTAAAAATTTAGCAAAACAATTTTTAG
ATAAAGTTGAATTAAGAGAGCGTATGAACCATCTGCCAACAGAATTATCTGGGGGACAGAAGCAACGTGTAGCAATCGCG
CGTGCTTTGGTGAATAGCCCATCTATTATTCTAGCAGATGAGCCGACTGGTGCCTTGGATACAAAGACGGGTGAGCAAAT
TATGCAGTTCCTAACGGAATTAAATCAAGAAGGTAAAACCATTATCATGGTAACTCATGAACCAGAAATCGCCGATTATG
CGACACGTAAAATTGTTATTCGTGATGGCGAAATTACAGCAGATACTACTGATAGTATTAGAATTGATTAA

Protein sequence : 
MTTNRKELIRLHQIVKSYQNGDQKLQVLKNIDLTVYEGEFLAIMGPSGSGKSTLMNIIGLLDSPTSGDYSLNGKRVEELS
QTKLAQVRNKEIGFVFQQFFLLSKLTALQNVELPLIYAGVAPKKRKNLAKQFLDKVELRERMNHLPTELSGGQKQRVAIA
RALVNSPSIILADEPTGALDTKTGEQIMQFLTELNQEGKTIIMVTHEPEIADYATRKIVIRDGEITADTTDSIRID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-36 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-37 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-37 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-37 44
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 1e-29 42
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_006764479.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-82 75
lolD YP_006764479.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-44 48
lolD YP_006764479.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-39 44
lolD YP_006764479.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_006764479.1 ABC transporter ATP-binding protein VFG0869 Protein 4e-27 41